Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cks1brtQ3UNC9 Rab21-202ENSMUST00000218831 843 ntBASIC16.81■□□□□ 0.28
Cks1brtQ3UNC9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cks1brtQ3UNC9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cks1brtQ3UNC9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cks1brtQ3UNC9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.8■□□□□ 0.28
Cks1brtQ3UNC9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.8■□□□□ 0.28
Cks1brtQ3UNC9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cks1brtQ3UNC9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cks1brtQ3UNC9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cks1brtQ3UNC9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cks1brtQ3UNC9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cks1brtQ3UNC9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cks1brtQ3UNC9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cks1brtQ3UNC9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Cks1brtQ3UNC9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.79■□□□□ 0.28
Cks1brtQ3UNC9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cks1brtQ3UNC9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cks1brtQ3UNC9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cks1brtQ3UNC9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks1brtQ3UNC9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks1brtQ3UNC9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks1brtQ3UNC9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cks1brtQ3UNC9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks1brtQ3UNC9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Cks1brtQ3UNC9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cks1brtQ3UNC9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cks1brtQ3UNC9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cks1brtQ3UNC9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks1brtQ3UNC9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cks1brtQ3UNC9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.76■□□□□ 0.27
Cks1brtQ3UNC9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cks1brtQ3UNC9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cks1brtQ3UNC9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cks1brtQ3UNC9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cks1brtQ3UNC9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cks1brtQ3UNC9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Cks1brtQ3UNC9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cks1brtQ3UNC9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cks1brtQ3UNC9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks1brtQ3UNC9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.74■□□□□ 0.27
Cks1brtQ3UNC9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks1brtQ3UNC9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks1brtQ3UNC9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cks1brtQ3UNC9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks1brtQ3UNC9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cks1brtQ3UNC9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks1brtQ3UNC9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks1brtQ3UNC9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cks1brtQ3UNC9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks1brtQ3UNC9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks1brtQ3UNC9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks1brtQ3UNC9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.72■□□□□ 0.27
Cks1brtQ3UNC9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cks1brtQ3UNC9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cks1brtQ3UNC9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cks1brtQ3UNC9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks1brtQ3UNC9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cks1brtQ3UNC9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks1brtQ3UNC9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks1brtQ3UNC9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks1brtQ3UNC9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cks1brtQ3UNC9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.7■□□□□ 0.26
Cks1brtQ3UNC9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.7■□□□□ 0.26
Cks1brtQ3UNC9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cks1brtQ3UNC9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cks1brtQ3UNC9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Cks1brtQ3UNC9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cks1brtQ3UNC9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.69■□□□□ 0.26
Cks1brtQ3UNC9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Cks1brtQ3UNC9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cks1brtQ3UNC9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cks1brtQ3UNC9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cks1brtQ3UNC9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cks1brtQ3UNC9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cks1brtQ3UNC9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cks1brtQ3UNC9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cks1brtQ3UNC9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cks1brtQ3UNC9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cks1brtQ3UNC9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Cks1brtQ3UNC9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cks1brtQ3UNC9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cks1brtQ3UNC9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cks1brtQ3UNC9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cks1brtQ3UNC9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cks1brtQ3UNC9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cks1brtQ3UNC9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1brtQ3UNC9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1brtQ3UNC9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Cks1brtQ3UNC9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms