Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22,55■■□□□ 1,2
Spg11Q3UHA3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22,55■■□□□ 1,2
Spg11Q3UHA3 Gm12818-201ENSMUST00000117562 1349 ntBASIC22,55■■□□□ 1,2
Spg11Q3UHA3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22,54■■□□□ 1,2
Spg11Q3UHA3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22,53■■□□□ 1,2
Spg11Q3UHA3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22,53■■□□□ 1,2
Spg11Q3UHA3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22,53■■□□□ 1,2
Spg11Q3UHA3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22,53■■□□□ 1,2
Spg11Q3UHA3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22,53■■□□□ 1,2
Spg11Q3UHA3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22,53■■□□□ 1,2
Spg11Q3UHA3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22,53■■□□□ 1,2
Spg11Q3UHA3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22,52■■□□□ 1,2
Spg11Q3UHA3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22,52■■□□□ 1,2
Spg11Q3UHA3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22,52■■□□□ 1,19
Spg11Q3UHA3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Spg11Q3UHA3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22,5■■□□□ 1,19
Spg11Q3UHA3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22,5■■□□□ 1,19
Spg11Q3UHA3 Gm13238-201ENSMUST00000117655 780 ntBASIC22,5■■□□□ 1,19
Spg11Q3UHA3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22,49■■□□□ 1,19
Spg11Q3UHA3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22,49■■□□□ 1,19
Spg11Q3UHA3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22,49■■□□□ 1,19
Spg11Q3UHA3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22,48■■□□□ 1,19
Spg11Q3UHA3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22,48■■□□□ 1,19
Spg11Q3UHA3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,48■■□□□ 1,19
Spg11Q3UHA3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22,48■■□□□ 1,19
Spg11Q3UHA3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22,48■■□□□ 1,19
Spg11Q3UHA3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22,48■■□□□ 1,19
Spg11Q3UHA3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22,47■■□□□ 1,19
Spg11Q3UHA3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22,47■■□□□ 1,19
Spg11Q3UHA3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22,46■■□□□ 1,19
Spg11Q3UHA3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22,46■■□□□ 1,19
Spg11Q3UHA3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22,46■■□□□ 1,19
Spg11Q3UHA3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22,45■■□□□ 1,19
Spg11Q3UHA3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22,45■■□□□ 1,18
Spg11Q3UHA3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,18
Spg11Q3UHA3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22,44■■□□□ 1,18
Spg11Q3UHA3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22,44■■□□□ 1,18
Spg11Q3UHA3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,44■■□□□ 1,18
Spg11Q3UHA3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22,44■■□□□ 1,18
Spg11Q3UHA3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22,43■■□□□ 1,18
Spg11Q3UHA3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Spg11Q3UHA3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Spg11Q3UHA3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22,42■■□□□ 1,18
Spg11Q3UHA3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22,42■■□□□ 1,18
Spg11Q3UHA3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22,41■■□□□ 1,18
Spg11Q3UHA3 Gm13889-201ENSMUST00000099689 1386 ntBASIC22,41■■□□□ 1,18
Spg11Q3UHA3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22,41■■□□□ 1,18
Spg11Q3UHA3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Spg11Q3UHA3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22,4■■□□□ 1,18
Spg11Q3UHA3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22,4■■□□□ 1,18
Spg11Q3UHA3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Spg11Q3UHA3 Gm43566-201ENSMUST00000196851 808 ntBASIC22,39■■□□□ 1,18
Spg11Q3UHA3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,18
Spg11Q3UHA3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22,38■■□□□ 1,17
Spg11Q3UHA3 Gm45444-201ENSMUST00000211394 898 ntBASIC22,38■■□□□ 1,17
Spg11Q3UHA3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
Spg11Q3UHA3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
Spg11Q3UHA3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22,37■■□□□ 1,17
Spg11Q3UHA3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22,37■■□□□ 1,17
Spg11Q3UHA3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
Spg11Q3UHA3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22,36■■□□□ 1,17
Spg11Q3UHA3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
Spg11Q3UHA3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22,36■■□□□ 1,17
Spg11Q3UHA3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22,36■■□□□ 1,17
Spg11Q3UHA3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
Spg11Q3UHA3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
Spg11Q3UHA3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22,35■■□□□ 1,17
Spg11Q3UHA3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Spg11Q3UHA3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Spg11Q3UHA3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22,34■■□□□ 1,17
Spg11Q3UHA3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22,33■■□□□ 1,17
Spg11Q3UHA3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22,33■■□□□ 1,17
Spg11Q3UHA3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22,33■■□□□ 1,17
Spg11Q3UHA3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22,33■■□□□ 1,17
Spg11Q3UHA3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22,32■■□□□ 1,16
Spg11Q3UHA3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22,32■■□□□ 1,16
Spg11Q3UHA3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22,32■■□□□ 1,16
Spg11Q3UHA3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22,32■■□□□ 1,16
Spg11Q3UHA3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22,32■■□□□ 1,16
Spg11Q3UHA3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22,31■■□□□ 1,16
Spg11Q3UHA3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Spg11Q3UHA3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Spg11Q3UHA3 Nsd1-203ENSMUST00000224156 1149 ntBASIC22,3■■□□□ 1,16
Spg11Q3UHA3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Spg11Q3UHA3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,3■■□□□ 1,16
Spg11Q3UHA3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22,29■■□□□ 1,16
Spg11Q3UHA3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22,29■■□□□ 1,16
Spg11Q3UHA3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22,29■■□□□ 1,16
Spg11Q3UHA3 Pcf11-205ENSMUST00000208255 1720 ntBASIC22,29■■□□□ 1,16
Spg11Q3UHA3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22,28■■□□□ 1,16
Spg11Q3UHA3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,28■■□□□ 1,16
Spg11Q3UHA3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22,28■■□□□ 1,16
Spg11Q3UHA3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22,28■■□□□ 1,16
Spg11Q3UHA3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22,28■■□□□ 1,16
Spg11Q3UHA3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22,28■■□□□ 1,16
Spg11Q3UHA3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,16
Spg11Q3UHA3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,16
Spg11Q3UHA3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22,27■■□□□ 1,16
Spg11Q3UHA3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22,26■■□□□ 1,15
Spg11Q3UHA3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22,26■■□□□ 1,15
Retrieved 100 of 76,532 protein–RNA pairs in 20,4 ms