Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Carmil3Q3UFQ8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Carmil3Q3UFQ8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Carmil3Q3UFQ8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.55■■■□□ 2.16
Carmil3Q3UFQ8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Carmil3Q3UFQ8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Carmil3Q3UFQ8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Carmil3Q3UFQ8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Carmil3Q3UFQ8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Carmil3Q3UFQ8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Carmil3Q3UFQ8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Carmil3Q3UFQ8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Carmil3Q3UFQ8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Carmil3Q3UFQ8 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.51■■■□□ 2.15
Carmil3Q3UFQ8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Carmil3Q3UFQ8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Carmil3Q3UFQ8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Carmil3Q3UFQ8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Carmil3Q3UFQ8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Carmil3Q3UFQ8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Carmil3Q3UFQ8 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.48■■■□□ 2.15
Carmil3Q3UFQ8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Carmil3Q3UFQ8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Carmil3Q3UFQ8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Carmil3Q3UFQ8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Carmil3Q3UFQ8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Carmil3Q3UFQ8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Carmil3Q3UFQ8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC28.45■■■□□ 2.14
Carmil3Q3UFQ8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Carmil3Q3UFQ8 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.43■■■□□ 2.14
Carmil3Q3UFQ8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Carmil3Q3UFQ8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Carmil3Q3UFQ8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.41■■■□□ 2.14
Carmil3Q3UFQ8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Carmil3Q3UFQ8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Carmil3Q3UFQ8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Carmil3Q3UFQ8 Gm27502-201ENSMUST00000183495 199 ntBASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.14
Carmil3Q3UFQ8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.39■■■□□ 2.14
Carmil3Q3UFQ8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Carmil3Q3UFQ8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC28.38■■■□□ 2.13
Carmil3Q3UFQ8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC28.36■■■□□ 2.13
Carmil3Q3UFQ8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Carmil3Q3UFQ8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Carmil3Q3UFQ8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Carmil3Q3UFQ8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Carmil3Q3UFQ8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Carmil3Q3UFQ8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Carmil3Q3UFQ8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Carmil3Q3UFQ8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Carmil3Q3UFQ8 Gm7332-201ENSMUST00000118351 454 ntBASIC28.32■■■□□ 2.12
Carmil3Q3UFQ8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
Carmil3Q3UFQ8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Carmil3Q3UFQ8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
Carmil3Q3UFQ8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Carmil3Q3UFQ8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Carmil3Q3UFQ8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC28.29■■■□□ 2.12
Carmil3Q3UFQ8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Carmil3Q3UFQ8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Carmil3Q3UFQ8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Carmil3Q3UFQ8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Carmil3Q3UFQ8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Carmil3Q3UFQ8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Carmil3Q3UFQ8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Carmil3Q3UFQ8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
Carmil3Q3UFQ8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.27■■■□□ 2.12
Carmil3Q3UFQ8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Carmil3Q3UFQ8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.26■■■□□ 2.12
Carmil3Q3UFQ8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.26■■■□□ 2.11
Carmil3Q3UFQ8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Carmil3Q3UFQ8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Carmil3Q3UFQ8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Carmil3Q3UFQ8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Carmil3Q3UFQ8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Carmil3Q3UFQ8 Gm9812-201ENSMUST00000061934 968 ntBASIC28.24■■■□□ 2.11
Carmil3Q3UFQ8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.24■■■□□ 2.11
Carmil3Q3UFQ8 Gm14523-201ENSMUST00000117260 558 ntBASIC28.24■■■□□ 2.11
Carmil3Q3UFQ8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Carmil3Q3UFQ8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Carmil3Q3UFQ8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Carmil3Q3UFQ8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Carmil3Q3UFQ8 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.22■■■□□ 2.11
Carmil3Q3UFQ8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.22■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms