Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Carmil3Q3UFQ8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Carmil3Q3UFQ8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Carmil3Q3UFQ8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.55■■■□□ 2.16
Carmil3Q3UFQ8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Carmil3Q3UFQ8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Carmil3Q3UFQ8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Carmil3Q3UFQ8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Carmil3Q3UFQ8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Carmil3Q3UFQ8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Carmil3Q3UFQ8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Carmil3Q3UFQ8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Carmil3Q3UFQ8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Carmil3Q3UFQ8 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.51■■■□□ 2.15
Carmil3Q3UFQ8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Carmil3Q3UFQ8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Carmil3Q3UFQ8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Carmil3Q3UFQ8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Carmil3Q3UFQ8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Carmil3Q3UFQ8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Carmil3Q3UFQ8 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.48■■■□□ 2.15
Carmil3Q3UFQ8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Carmil3Q3UFQ8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Carmil3Q3UFQ8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Carmil3Q3UFQ8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Carmil3Q3UFQ8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Carmil3Q3UFQ8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Carmil3Q3UFQ8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC28.45■■■□□ 2.14
Carmil3Q3UFQ8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Carmil3Q3UFQ8 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.43■■■□□ 2.14
Carmil3Q3UFQ8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Carmil3Q3UFQ8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Carmil3Q3UFQ8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.41■■■□□ 2.14
Carmil3Q3UFQ8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Carmil3Q3UFQ8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Carmil3Q3UFQ8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Carmil3Q3UFQ8 Gm27502-201ENSMUST00000183495 199 ntBASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Carmil3Q3UFQ8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.14
Carmil3Q3UFQ8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.39■■■□□ 2.14
Carmil3Q3UFQ8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Carmil3Q3UFQ8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC28.38■■■□□ 2.13
Carmil3Q3UFQ8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.37■■■□□ 2.13
Carmil3Q3UFQ8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC28.36■■■□□ 2.13
Carmil3Q3UFQ8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Carmil3Q3UFQ8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Carmil3Q3UFQ8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Carmil3Q3UFQ8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Carmil3Q3UFQ8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Carmil3Q3UFQ8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Carmil3Q3UFQ8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.34■■■□□ 2.13
Carmil3Q3UFQ8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Carmil3Q3UFQ8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Carmil3Q3UFQ8 Gm7332-201ENSMUST00000118351 454 ntBASIC28.32■■■□□ 2.12
Carmil3Q3UFQ8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
Carmil3Q3UFQ8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Carmil3Q3UFQ8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
Carmil3Q3UFQ8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Carmil3Q3UFQ8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Carmil3Q3UFQ8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC28.29■■■□□ 2.12
Carmil3Q3UFQ8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Carmil3Q3UFQ8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Carmil3Q3UFQ8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Carmil3Q3UFQ8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Carmil3Q3UFQ8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Carmil3Q3UFQ8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Carmil3Q3UFQ8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Carmil3Q3UFQ8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
Carmil3Q3UFQ8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.27■■■□□ 2.12
Carmil3Q3UFQ8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Carmil3Q3UFQ8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.26■■■□□ 2.12
Carmil3Q3UFQ8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.26■■■□□ 2.11
Carmil3Q3UFQ8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Carmil3Q3UFQ8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Carmil3Q3UFQ8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Carmil3Q3UFQ8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Carmil3Q3UFQ8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Carmil3Q3UFQ8 Gm9812-201ENSMUST00000061934 968 ntBASIC28.24■■■□□ 2.11
Carmil3Q3UFQ8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.24■■■□□ 2.11
Carmil3Q3UFQ8 Gm14523-201ENSMUST00000117260 558 ntBASIC28.24■■■□□ 2.11
Carmil3Q3UFQ8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Carmil3Q3UFQ8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Carmil3Q3UFQ8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Carmil3Q3UFQ8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Carmil3Q3UFQ8 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.22■■■□□ 2.11
Carmil3Q3UFQ8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.22■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms