Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.41■□□□□ 0.7
Tmem88bQ3TYP4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Tmem88bQ3TYP4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem88bQ3TYP4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tmem88bQ3TYP4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem88bQ3TYP4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem88bQ3TYP4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem88bQ3TYP4 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.4■□□□□ 0.7
Tmem88bQ3TYP4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.4■□□□□ 0.7
Tmem88bQ3TYP4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem88bQ3TYP4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmem88bQ3TYP4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmem88bQ3TYP4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tmem88bQ3TYP4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem88bQ3TYP4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem88bQ3TYP4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem88bQ3TYP4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.37■□□□□ 0.69
Tmem88bQ3TYP4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmem88bQ3TYP4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tmem88bQ3TYP4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmem88bQ3TYP4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmem88bQ3TYP4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Tmem88bQ3TYP4 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.37■□□□□ 0.69
Tmem88bQ3TYP4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmem88bQ3TYP4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tmem88bQ3TYP4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tmem88bQ3TYP4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem88bQ3TYP4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem88bQ3TYP4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tmem88bQ3TYP4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.35■□□□□ 0.69
Tmem88bQ3TYP4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.34■□□□□ 0.69
Tmem88bQ3TYP4 Gm5812-201ENSMUST00000061073 957 ntBASIC19.34■□□□□ 0.69
Tmem88bQ3TYP4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Tmem88bQ3TYP4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmem88bQ3TYP4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmem88bQ3TYP4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.32■□□□□ 0.68
Tmem88bQ3TYP4 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.32■□□□□ 0.68
Tmem88bQ3TYP4 Gm22567-201ENSMUST00000175542 342 ntBASIC19.31■□□□□ 0.68
Tmem88bQ3TYP4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Tmem88bQ3TYP4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Tmem88bQ3TYP4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tmem88bQ3TYP4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem88bQ3TYP4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem88bQ3TYP4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem88bQ3TYP4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem88bQ3TYP4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem88bQ3TYP4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem88bQ3TYP4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem88bQ3TYP4 Gm10420-201ENSMUST00000121713 882 ntBASIC19.29■□□□□ 0.68
Tmem88bQ3TYP4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.29■□□□□ 0.68
Tmem88bQ3TYP4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tmem88bQ3TYP4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tmem88bQ3TYP4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem88bQ3TYP4 Gm9812-201ENSMUST00000061934 968 ntBASIC19.28■□□□□ 0.68
Tmem88bQ3TYP4 Gm5921-201ENSMUST00000075898 882 ntBASIC19.28■□□□□ 0.68
Tmem88bQ3TYP4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem88bQ3TYP4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem88bQ3TYP4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem88bQ3TYP4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.27■□□□□ 0.68
Tmem88bQ3TYP4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem88bQ3TYP4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem88bQ3TYP4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tmem88bQ3TYP4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem88bQ3TYP4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.26■□□□□ 0.67
Tmem88bQ3TYP4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem88bQ3TYP4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem88bQ3TYP4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem88bQ3TYP4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.26■□□□□ 0.67
Tmem88bQ3TYP4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem88bQ3TYP4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem88bQ3TYP4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem88bQ3TYP4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem88bQ3TYP4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem88bQ3TYP4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.23■□□□□ 0.67
Tmem88bQ3TYP4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem88bQ3TYP4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tmem88bQ3TYP4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tmem88bQ3TYP4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.23■□□□□ 0.67
Tmem88bQ3TYP4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.23■□□□□ 0.67
Tmem88bQ3TYP4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem88bQ3TYP4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem88bQ3TYP4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem88bQ3TYP4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem88bQ3TYP4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem88bQ3TYP4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Tmem88bQ3TYP4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.2■□□□□ 0.66
Tmem88bQ3TYP4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tmem88bQ3TYP4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem88bQ3TYP4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.2■□□□□ 0.66
Tmem88bQ3TYP4 Gm15546-201ENSMUST00000122095 826 ntBASIC19.2■□□□□ 0.66
Tmem88bQ3TYP4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.2■□□□□ 0.66
Tmem88bQ3TYP4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.2■□□□□ 0.66
Tmem88bQ3TYP4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem88bQ3TYP4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem88bQ3TYP4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tmem88bQ3TYP4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem88bQ3TYP4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem88bQ3TYP4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.18■□□□□ 0.66
Tmem88bQ3TYP4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem88bQ3TYP4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms