Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx3-2P97503 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Nkx3-2P97503 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx3-2P97503 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx3-2P97503 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx3-2P97503 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx3-2P97503 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Nkx3-2P97503 Gm6311-201ENSMUST00000073790 878 ntBASIC21.84■■□□□ 1.09
Nkx3-2P97503 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx3-2P97503 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx3-2P97503 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx3-2P97503 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Nkx3-2P97503 Gm11175-201ENSMUST00000116172 543 ntBASIC21.83■■□□□ 1.09
Nkx3-2P97503 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.83■■□□□ 1.09
Nkx3-2P97503 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx3-2P97503 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx3-2P97503 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nkx3-2P97503 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx3-2P97503 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.81■■□□□ 1.08
Nkx3-2P97503 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nkx3-2P97503 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx3-2P97503 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx3-2P97503 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.8■■□□□ 1.08
Nkx3-2P97503 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx3-2P97503 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx3-2P97503 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx3-2P97503 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx3-2P97503 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx3-2P97503 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx3-2P97503 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.78■■□□□ 1.08
Nkx3-2P97503 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Nkx3-2P97503 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx3-2P97503 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx3-2P97503 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx3-2P97503 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Nkx3-2P97503 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.76■■□□□ 1.07
Nkx3-2P97503 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx3-2P97503 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx3-2P97503 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx3-2P97503 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Nkx3-2P97503 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx3-2P97503 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx3-2P97503 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Nkx3-2P97503 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.74■■□□□ 1.07
Nkx3-2P97503 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx3-2P97503 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.74■■□□□ 1.07
Nkx3-2P97503 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Nkx3-2P97503 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx3-2P97503 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx3-2P97503 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx3-2P97503 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.72■■□□□ 1.07
Nkx3-2P97503 Gm4799-201ENSMUST00000095396 657 ntBASIC21.72■■□□□ 1.07
Nkx3-2P97503 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.71■■□□□ 1.07
Nkx3-2P97503 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx3-2P97503 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx3-2P97503 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx3-2P97503 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx3-2P97503 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.7■■□□□ 1.06
Nkx3-2P97503 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx3-2P97503 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx3-2P97503 Mir3960-201ENSMUST00000198213 73 ntBASIC21.69■■□□□ 1.06
Nkx3-2P97503 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Nkx3-2P97503 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nkx3-2P97503 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Nkx3-2P97503 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Nkx3-2P97503 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nkx3-2P97503 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx3-2P97503 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx3-2P97503 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx3-2P97503 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx3-2P97503 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Nkx3-2P97503 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx3-2P97503 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx3-2P97503 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx3-2P97503 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Nkx3-2P97503 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx3-2P97503 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx3-2P97503 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx3-2P97503 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx3-2P97503 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx3-2P97503 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx3-2P97503 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.64■■□□□ 1.05
Nkx3-2P97503 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx3-2P97503 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx3-2P97503 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx3-2P97503 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.62■■□□□ 1.05
Nkx3-2P97503 Gm45364-201ENSMUST00000210883 159 ntBASIC21.62■■□□□ 1.05
Nkx3-2P97503 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx3-2P97503 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx3-2P97503 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx3-2P97503 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.61■■□□□ 1.05
Nkx3-2P97503 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx3-2P97503 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx3-2P97503 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.61■■□□□ 1.05
Nkx3-2P97503 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx3-2P97503 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx3-2P97503 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx3-2P97503 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Nkx3-2P97503 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.6■■□□□ 1.05
Nkx3-2P97503 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms