Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.8■□□□□ 0.28
PrkdcP97313 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.79■□□□□ 0.28
PrkdcP97313 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PrkdcP97313 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PrkdcP97313 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PrkdcP97313 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.78■□□□□ 0.28
PrkdcP97313 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PrkdcP97313 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PrkdcP97313 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.78■□□□□ 0.28
PrkdcP97313 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.77■□□□□ 0.28
PrkdcP97313 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PrkdcP97313 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PrkdcP97313 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PrkdcP97313 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PrkdcP97313 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.76■□□□□ 0.27
PrkdcP97313 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PrkdcP97313 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.76■□□□□ 0.27
PrkdcP97313 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PrkdcP97313 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PrkdcP97313 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PrkdcP97313 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PrkdcP97313 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
PrkdcP97313 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PrkdcP97313 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PrkdcP97313 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PrkdcP97313 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PrkdcP97313 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PrkdcP97313 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PrkdcP97313 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrkdcP97313 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.72■□□□□ 0.27
PrkdcP97313 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrkdcP97313 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrkdcP97313 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrkdcP97313 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PrkdcP97313 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
PrkdcP97313 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.7■□□□□ 0.26
PrkdcP97313 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
PrkdcP97313 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PrkdcP97313 Gm13238-201ENSMUST00000117655 780 ntBASIC16.69■□□□□ 0.26
PrkdcP97313 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PrkdcP97313 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PrkdcP97313 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PrkdcP97313 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PrkdcP97313 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PrkdcP97313 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PrkdcP97313 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PrkdcP97313 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.67■□□□□ 0.26
PrkdcP97313 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PrkdcP97313 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PrkdcP97313 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PrkdcP97313 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PrkdcP97313 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PrkdcP97313 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PrkdcP97313 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PrkdcP97313 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PrkdcP97313 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PrkdcP97313 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PrkdcP97313 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PrkdcP97313 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
PrkdcP97313 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.64■□□□□ 0.26
PrkdcP97313 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.64■□□□□ 0.25
PrkdcP97313 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PrkdcP97313 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrkdcP97313 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PrkdcP97313 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.63■□□□□ 0.25
PrkdcP97313 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PrkdcP97313 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkdcP97313 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PrkdcP97313 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PrkdcP97313 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PrkdcP97313 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkdcP97313 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PrkdcP97313 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrkdcP97313 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.61■□□□□ 0.25
PrkdcP97313 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkdcP97313 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PrkdcP97313 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrkdcP97313 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.61■□□□□ 0.25
PrkdcP97313 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.6■□□□□ 0.25
PrkdcP97313 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PrkdcP97313 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PrkdcP97313 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PrkdcP97313 Gm9812-201ENSMUST00000061934 968 ntBASIC16.59■□□□□ 0.25
PrkdcP97313 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PrkdcP97313 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PrkdcP97313 Gm9959-201ENSMUST00000068277 390 ntBASIC16.57■□□□□ 0.24
PrkdcP97313 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PrkdcP97313 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PrkdcP97313 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PrkdcP97313 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PrkdcP97313 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PrkdcP97313 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PrkdcP97313 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PrkdcP97313 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.57■□□□□ 0.24
PrkdcP97313 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PrkdcP97313 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.56■□□□□ 0.24
PrkdcP97313 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PrkdcP97313 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PrkdcP97313 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.55■□□□□ 0.24
PrkdcP97313 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms