Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.31■□□□□ 0.68
Lsm5P62322 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lsm5P62322 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lsm5P62322 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Lsm5P62322 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm5P62322 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm5P62322 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm5P62322 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lsm5P62322 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm5P62322 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm5P62322 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm5P62322 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm5P62322 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm5P62322 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.29■□□□□ 0.68
Lsm5P62322 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm5P62322 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm5P62322 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lsm5P62322 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm5P62322 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm5P62322 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm5P62322 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm5P62322 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm5P62322 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm5P62322 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.27■□□□□ 0.68
Lsm5P62322 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Lsm5P62322 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Lsm5P62322 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.27■□□□□ 0.68
Lsm5P62322 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm5P62322 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm5P62322 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm5P62322 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm5P62322 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm5P62322 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.26■□□□□ 0.67
Lsm5P62322 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lsm5P62322 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm5P62322 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm5P62322 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.25■□□□□ 0.67
Lsm5P62322 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm5P62322 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm5P62322 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Lsm5P62322 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm5P62322 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.24■□□□□ 0.67
Lsm5P62322 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lsm5P62322 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm5P62322 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm5P62322 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm5P62322 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm5P62322 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm5P62322 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm5P62322 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm5P62322 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm5P62322 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.22■□□□□ 0.67
Lsm5P62322 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm5P62322 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm5P62322 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm5P62322 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lsm5P62322 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm5P62322 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm5P62322 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm5P62322 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm5P62322 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm5P62322 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm5P62322 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.2■□□□□ 0.66
Lsm5P62322 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.2■□□□□ 0.66
Lsm5P62322 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm5P62322 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Lsm5P62322 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm5P62322 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm5P62322 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm5P62322 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm5P62322 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Lsm5P62322 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm5P62322 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm5P62322 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm5P62322 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm5P62322 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm5P62322 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm5P62322 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm5P62322 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm5P62322 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm5P62322 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm5P62322 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm5P62322 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm5P62322 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm5P62322 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm5P62322 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm5P62322 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm5P62322 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm5P62322 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm5P62322 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Lsm5P62322 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm5P62322 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm5P62322 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm5P62322 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm5P62322 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm5P62322 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm5P62322 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm5P62322 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm5P62322 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm5P62322 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms