Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sssca1P56873 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sssca1P56873 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sssca1P56873 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sssca1P56873 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sssca1P56873 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sssca1P56873 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.66■□□□□ 0.58
Sssca1P56873 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sssca1P56873 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sssca1P56873 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sssca1P56873 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sssca1P56873 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sssca1P56873 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sssca1P56873 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.65■□□□□ 0.58
Sssca1P56873 Zfp131-205ENSMUST00000223812 663 ntBASIC18.65■□□□□ 0.58
Sssca1P56873 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sssca1P56873 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sssca1P56873 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sssca1P56873 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sssca1P56873 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sssca1P56873 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sssca1P56873 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.64■□□□□ 0.57
Sssca1P56873 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sssca1P56873 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sssca1P56873 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sssca1P56873 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sssca1P56873 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.64■□□□□ 0.57
Sssca1P56873 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sssca1P56873 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sssca1P56873 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sssca1P56873 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.63■□□□□ 0.57
Sssca1P56873 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.62■□□□□ 0.57
Sssca1P56873 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.62■□□□□ 0.57
Sssca1P56873 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sssca1P56873 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Sssca1P56873 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sssca1P56873 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.62■□□□□ 0.57
Sssca1P56873 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sssca1P56873 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sssca1P56873 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sssca1P56873 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.61■□□□□ 0.57
Sssca1P56873 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.61■□□□□ 0.57
Sssca1P56873 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sssca1P56873 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Sssca1P56873 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sssca1P56873 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sssca1P56873 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sssca1P56873 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sssca1P56873 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sssca1P56873 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.58■□□□□ 0.57
Sssca1P56873 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sssca1P56873 Gm24970-201ENSMUST00000175582 82 ntBASIC18.58■□□□□ 0.56
Sssca1P56873 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sssca1P56873 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sssca1P56873 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sssca1P56873 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sssca1P56873 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sssca1P56873 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sssca1P56873 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sssca1P56873 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sssca1P56873 Particl-201ENSMUST00000205370 1560 ntBASIC18.56■□□□□ 0.56
Sssca1P56873 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sssca1P56873 Gm30023-201ENSMUST00000197970 889 ntBASIC18.56■□□□□ 0.56
Sssca1P56873 Gm9397-201ENSMUST00000200125 605 ntBASIC18.56■□□□□ 0.56
Sssca1P56873 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sssca1P56873 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
Sssca1P56873 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sssca1P56873 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sssca1P56873 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.55■□□□□ 0.56
Sssca1P56873 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sssca1P56873 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sssca1P56873 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sssca1P56873 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sssca1P56873 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sssca1P56873 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Sssca1P56873 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Sssca1P56873 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.53■□□□□ 0.56
Sssca1P56873 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sssca1P56873 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sssca1P56873 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sssca1P56873 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sssca1P56873 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sssca1P56873 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sssca1P56873 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sssca1P56873 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.49■□□□□ 0.55
Sssca1P56873 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sssca1P56873 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sssca1P56873 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sssca1P56873 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sssca1P56873 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sssca1P56873 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sssca1P56873 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.47■□□□□ 0.55
Sssca1P56873 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sssca1P56873 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Sssca1P56873 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sssca1P56873 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sssca1P56873 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sssca1P56873 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sssca1P56873 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sssca1P56873 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms