Protein–RNA interactions for Protein: P56842

Tcl1b3, Protein TCL1B3, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcl1b3P56842 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tcl1b3P56842 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tcl1b3P56842 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcl1b3P56842 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Tcl1b3P56842 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.35■□□□□ 0.05
Tcl1b3P56842 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tcl1b3P56842 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcl1b3P56842 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcl1b3P56842 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tcl1b3P56842 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tcl1b3P56842 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcl1b3P56842 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tcl1b3P56842 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Tcl1b3P56842 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcl1b3P56842 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Tcl1b3P56842 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Tcl1b3P56842 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tcl1b3P56842 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tcl1b3P56842 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Tcl1b3P56842 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcl1b3P56842 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tcl1b3P56842 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcl1b3P56842 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcl1b3P56842 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcl1b3P56842 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tcl1b3P56842 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcl1b3P56842 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcl1b3P56842 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tcl1b3P56842 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcl1b3P56842 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tcl1b3P56842 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcl1b3P56842 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcl1b3P56842 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.28■□□□□ 0.04
Tcl1b3P56842 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcl1b3P56842 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.28■□□□□ 0.04
Tcl1b3P56842 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcl1b3P56842 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tcl1b3P56842 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcl1b3P56842 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcl1b3P56842 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcl1b3P56842 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tcl1b3P56842 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.27■□□□□ 0.04
Tcl1b3P56842 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tcl1b3P56842 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tcl1b3P56842 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tcl1b3P56842 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tcl1b3P56842 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tcl1b3P56842 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tcl1b3P56842 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tcl1b3P56842 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Tcl1b3P56842 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tcl1b3P56842 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcl1b3P56842 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tcl1b3P56842 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcl1b3P56842 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Tcl1b3P56842 Particl-201ENSMUST00000205370 1560 ntBASIC15.25■□□□□ 0.03
Tcl1b3P56842 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC15.25■□□□□ 0.03
Tcl1b3P56842 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tcl1b3P56842 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tcl1b3P56842 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tcl1b3P56842 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tcl1b3P56842 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tcl1b3P56842 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tcl1b3P56842 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tcl1b3P56842 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tcl1b3P56842 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcl1b3P56842 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcl1b3P56842 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tcl1b3P56842 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tcl1b3P56842 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcl1b3P56842 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tcl1b3P56842 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tcl1b3P56842 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tcl1b3P56842 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tcl1b3P56842 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcl1b3P56842 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcl1b3P56842 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcl1b3P56842 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcl1b3P56842 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcl1b3P56842 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tcl1b3P56842 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Tcl1b3P56842 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.21■□□□□ 0.03
Tcl1b3P56842 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.21■□□□□ 0.02
Tcl1b3P56842 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcl1b3P56842 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.2■□□□□ 0.02
Tcl1b3P56842 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcl1b3P56842 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcl1b3P56842 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcl1b3P56842 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tcl1b3P56842 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcl1b3P56842 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcl1b3P56842 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.19■□□□□ 0.02
Tcl1b3P56842 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.19■□□□□ 0.02
Tcl1b3P56842 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.19■□□□□ 0.02
Tcl1b3P56842 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcl1b3P56842 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tcl1b3P56842 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Tcl1b3P56842 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Tcl1b3P56842 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Tcl1b3P56842 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms