Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.83■■□□□ 1.41
Lhx3P50481 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lhx3P50481 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lhx3P50481 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lhx3P50481 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lhx3P50481 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Lhx3P50481 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.81■■□□□ 1.4
Lhx3P50481 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Lhx3P50481 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.81■■□□□ 1.4
Lhx3P50481 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Lhx3P50481 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Lhx3P50481 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.8■■□□□ 1.4
Lhx3P50481 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lhx3P50481 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Lhx3P50481 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Lhx3P50481 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.79■■□□□ 1.4
Lhx3P50481 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Lhx3P50481 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lhx3P50481 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lhx3P50481 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.77■■□□□ 1.4
Lhx3P50481 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Lhx3P50481 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lhx3P50481 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Lhx3P50481 Gm4799-201ENSMUST00000095396 657 ntBASIC23.76■■□□□ 1.39
Lhx3P50481 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lhx3P50481 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Lhx3P50481 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lhx3P50481 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
Lhx3P50481 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lhx3P50481 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lhx3P50481 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lhx3P50481 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Lhx3P50481 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.73■■□□□ 1.39
Lhx3P50481 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.73■■□□□ 1.39
Lhx3P50481 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Lhx3P50481 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lhx3P50481 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Lhx3P50481 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Lhx3P50481 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.71■■□□□ 1.39
Lhx3P50481 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lhx3P50481 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lhx3P50481 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.7■■□□□ 1.38
Lhx3P50481 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.7■■□□□ 1.38
Lhx3P50481 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lhx3P50481 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lhx3P50481 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.69■■□□□ 1.38
Lhx3P50481 Mir3960-201ENSMUST00000198213 73 ntBASIC23.69■■□□□ 1.38
Lhx3P50481 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Lhx3P50481 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lhx3P50481 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lhx3P50481 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.68■■□□□ 1.38
Lhx3P50481 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lhx3P50481 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Lhx3P50481 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Lhx3P50481 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.67■■□□□ 1.38
Lhx3P50481 Gm45364-201ENSMUST00000210883 159 ntBASIC23.67■■□□□ 1.38
Lhx3P50481 Gm6311-201ENSMUST00000073790 878 ntBASIC23.67■■□□□ 1.38
Lhx3P50481 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Lhx3P50481 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lhx3P50481 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Lhx3P50481 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Lhx3P50481 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Lhx3P50481 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lhx3P50481 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lhx3P50481 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Lhx3P50481 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.65■■□□□ 1.38
Lhx3P50481 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.65■■□□□ 1.38
Lhx3P50481 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lhx3P50481 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lhx3P50481 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.65■■□□□ 1.38
Lhx3P50481 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Lhx3P50481 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Lhx3P50481 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Lhx3P50481 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lhx3P50481 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lhx3P50481 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lhx3P50481 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Lhx3P50481 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.62■■□□□ 1.37
Lhx3P50481 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Lhx3P50481 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lhx3P50481 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.6■■□□□ 1.37
Lhx3P50481 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.6■■□□□ 1.37
Lhx3P50481 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Lhx3P50481 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.59■■□□□ 1.37
Lhx3P50481 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Lhx3P50481 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lhx3P50481 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
Lhx3P50481 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.59■■□□□ 1.37
Lhx3P50481 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Lhx3P50481 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Lhx3P50481 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.58■■□□□ 1.37
Lhx3P50481 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.58■■□□□ 1.36
Lhx3P50481 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
Lhx3P50481 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.57■■□□□ 1.36
Lhx3P50481 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Lhx3P50481 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Lhx3P50481 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Lhx3P50481 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Lhx3P50481 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Lhx3P50481 Gm9812-201ENSMUST00000061934 968 ntBASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms