Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf1aP25118 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tnfrsf1aP25118 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf1aP25118 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf1aP25118 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf1aP25118 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1aP25118 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf1aP25118 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf1aP25118 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf1aP25118 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Tnfrsf1aP25118 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tnfrsf1aP25118 Nkain2-201ENSMUST00000092602 558 ntBASIC19.34■□□□□ 0.69
Tnfrsf1aP25118 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf1aP25118 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf1aP25118 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf1aP25118 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Particl-201ENSMUST00000205370 1560 ntBASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.32■□□□□ 0.68
Tnfrsf1aP25118 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf1aP25118 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf1aP25118 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Tnfrsf1aP25118 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1aP25118 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1aP25118 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1aP25118 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Tnfrsf1aP25118 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf1aP25118 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf1aP25118 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Tnfrsf1aP25118 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1aP25118 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnfrsf1aP25118 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1aP25118 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf1aP25118 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tnfrsf1aP25118 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1aP25118 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.26■□□□□ 0.67
Tnfrsf1aP25118 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1aP25118 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf1aP25118 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf1aP25118 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1aP25118 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1aP25118 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf1aP25118 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.23■□□□□ 0.67
Tnfrsf1aP25118 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf1aP25118 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf1aP25118 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf1aP25118 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfrsf1aP25118 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.22■□□□□ 0.67
Tnfrsf1aP25118 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.22■□□□□ 0.67
Tnfrsf1aP25118 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf1aP25118 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Tnfrsf1aP25118 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf1aP25118 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf1aP25118 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tnfrsf1aP25118 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1aP25118 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tnfrsf1aP25118 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1aP25118 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1aP25118 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf1aP25118 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1aP25118 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1aP25118 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1aP25118 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf1aP25118 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tnfrsf1aP25118 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf1aP25118 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 Gm6821-201ENSMUST00000107540 542 ntBASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms