Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.44■■□□□ 1.82
Hoxc6P10629 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Hoxc6P10629 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hoxc6P10629 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hoxc6P10629 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Hoxc6P10629 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Hoxc6P10629 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Hoxc6P10629 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.42■■□□□ 1.82
Hoxc6P10629 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Hoxc6P10629 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Hoxc6P10629 Gm14523-201ENSMUST00000117260 558 ntBASIC26.4■■□□□ 1.82
Hoxc6P10629 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Hoxc6P10629 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Hoxc6P10629 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.38■■□□□ 1.81
Hoxc6P10629 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.38■■□□□ 1.81
Hoxc6P10629 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.38■■□□□ 1.81
Hoxc6P10629 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Hoxc6P10629 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Hoxc6P10629 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Hoxc6P10629 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.36■■□□□ 1.81
Hoxc6P10629 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.36■■□□□ 1.81
Hoxc6P10629 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Hoxc6P10629 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Hoxc6P10629 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Hoxc6P10629 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.35■■□□□ 1.81
Hoxc6P10629 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hoxc6P10629 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hoxc6P10629 Gm9812-201ENSMUST00000061934 968 ntBASIC26.35■■□□□ 1.81
Hoxc6P10629 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hoxc6P10629 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hoxc6P10629 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hoxc6P10629 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.34■■□□□ 1.81
Hoxc6P10629 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Hoxc6P10629 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hoxc6P10629 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Hoxc6P10629 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Hoxc6P10629 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Hoxc6P10629 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Hoxc6P10629 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Hoxc6P10629 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Hoxc6P10629 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Hoxc6P10629 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Hoxc6P10629 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.31■■□□□ 1.8
Hoxc6P10629 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hoxc6P10629 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Hoxc6P10629 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Hoxc6P10629 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.3■■□□□ 1.8
Hoxc6P10629 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.3■■□□□ 1.8
Hoxc6P10629 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hoxc6P10629 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.28■■□□□ 1.8
Hoxc6P10629 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hoxc6P10629 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hoxc6P10629 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hoxc6P10629 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hoxc6P10629 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hoxc6P10629 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Hoxc6P10629 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Hoxc6P10629 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Hoxc6P10629 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Hoxc6P10629 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.25■■□□□ 1.79
Hoxc6P10629 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Hoxc6P10629 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Hoxc6P10629 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
Hoxc6P10629 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hoxc6P10629 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Hoxc6P10629 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hoxc6P10629 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hoxc6P10629 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Hoxc6P10629 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hoxc6P10629 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.22■■□□□ 1.79
Hoxc6P10629 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.22■■□□□ 1.79
Hoxc6P10629 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.22■■□□□ 1.79
Hoxc6P10629 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hoxc6P10629 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hoxc6P10629 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.21■■□□□ 1.79
Hoxc6P10629 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
Hoxc6P10629 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hoxc6P10629 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Hoxc6P10629 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.78
Hoxc6P10629 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.2■■□□□ 1.78
Hoxc6P10629 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Hoxc6P10629 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Hoxc6P10629 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Hoxc6P10629 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.18■■□□□ 1.78
Hoxc6P10629 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Hoxc6P10629 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Hoxc6P10629 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Hoxc6P10629 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Hoxc6P10629 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Hoxc6P10629 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.16■■□□□ 1.78
Hoxc6P10629 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Hoxc6P10629 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Hoxc6P10629 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Hoxc6P10629 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Hoxc6P10629 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
Hoxc6P10629 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Hoxc6P10629 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Hoxc6P10629 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Hoxc6P10629 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
Hoxc6P10629 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms