Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LtaP09225 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LtaP09225 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LtaP09225 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LtaP09225 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LtaP09225 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtaP09225 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtaP09225 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LtaP09225 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtaP09225 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LtaP09225 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtaP09225 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LtaP09225 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.88■□□□□ 0.61
LtaP09225 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.88■□□□□ 0.61
LtaP09225 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtaP09225 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtaP09225 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LtaP09225 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.87■□□□□ 0.61
LtaP09225 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.87■□□□□ 0.61
LtaP09225 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtaP09225 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.86■□□□□ 0.61
LtaP09225 Gm4799-201ENSMUST00000095396 657 ntBASIC18.86■□□□□ 0.61
LtaP09225 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtaP09225 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtaP09225 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtaP09225 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LtaP09225 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LtaP09225 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtaP09225 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LtaP09225 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LtaP09225 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LtaP09225 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LtaP09225 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LtaP09225 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LtaP09225 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LtaP09225 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LtaP09225 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LtaP09225 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LtaP09225 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LtaP09225 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LtaP09225 Gm6311-201ENSMUST00000073790 878 ntBASIC18.81■□□□□ 0.6
LtaP09225 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LtaP09225 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LtaP09225 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LtaP09225 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.8■□□□□ 0.6
LtaP09225 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LtaP09225 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LtaP09225 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LtaP09225 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LtaP09225 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LtaP09225 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LtaP09225 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LtaP09225 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LtaP09225 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LtaP09225 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.78■□□□□ 0.6
LtaP09225 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LtaP09225 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LtaP09225 Mir3960-201ENSMUST00000198213 73 ntBASIC18.77■□□□□ 0.6
LtaP09225 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.77■□□□□ 0.6
LtaP09225 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.77■□□□□ 0.6
LtaP09225 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LtaP09225 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LtaP09225 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LtaP09225 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
LtaP09225 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LtaP09225 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.76■□□□□ 0.59
LtaP09225 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.76■□□□□ 0.59
LtaP09225 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LtaP09225 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LtaP09225 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.75■□□□□ 0.59
LtaP09225 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LtaP09225 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LtaP09225 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.75■□□□□ 0.59
LtaP09225 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.75■□□□□ 0.59
LtaP09225 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LtaP09225 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LtaP09225 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.74■□□□□ 0.59
LtaP09225 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
LtaP09225 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LtaP09225 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LtaP09225 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.73■□□□□ 0.59
LtaP09225 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.73■□□□□ 0.59
LtaP09225 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LtaP09225 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LtaP09225 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LtaP09225 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LtaP09225 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LtaP09225 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LtaP09225 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LtaP09225 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LtaP09225 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LtaP09225 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.58
LtaP09225 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LtaP09225 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LtaP09225 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LtaP09225 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LtaP09225 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LtaP09225 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LtaP09225 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LtaP09225 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms