Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.35■□□□□ 0.69
Ercc1P07903 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc1P07903 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc1P07903 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc1P07903 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc1P07903 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc1P07903 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ercc1P07903 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Ercc1P07903 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ercc1P07903 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ercc1P07903 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ercc1P07903 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ercc1P07903 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.33■□□□□ 0.68
Ercc1P07903 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ercc1P07903 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc1P07903 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ercc1P07903 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ercc1P07903 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc1P07903 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc1P07903 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc1P07903 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Ercc1P07903 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ercc1P07903 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ercc1P07903 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ercc1P07903 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc1P07903 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ercc1P07903 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.28■□□□□ 0.68
Ercc1P07903 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ercc1P07903 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc1P07903 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ercc1P07903 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ercc1P07903 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Ercc1P07903 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ercc1P07903 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.27■□□□□ 0.68
Ercc1P07903 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ercc1P07903 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ercc1P07903 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ercc1P07903 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ercc1P07903 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ercc1P07903 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ercc1P07903 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc1P07903 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc1P07903 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc1P07903 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ercc1P07903 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc1P07903 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc1P07903 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc1P07903 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ercc1P07903 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc1P07903 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc1P07903 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.24■□□□□ 0.67
Ercc1P07903 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ercc1P07903 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc1P07903 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.23■□□□□ 0.67
Ercc1P07903 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc1P07903 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc1P07903 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc1P07903 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc1P07903 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc1P07903 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ercc1P07903 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc1P07903 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc1P07903 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Ercc1P07903 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc1P07903 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc1P07903 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Ercc1P07903 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.2■□□□□ 0.66
Ercc1P07903 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Ercc1P07903 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ercc1P07903 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc1P07903 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc1P07903 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc1P07903 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc1P07903 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc1P07903 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc1P07903 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc1P07903 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc1P07903 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc1P07903 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc1P07903 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ercc1P07903 Zfp131-205ENSMUST00000223812 663 ntBASIC19.18■□□□□ 0.66
Ercc1P07903 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ercc1P07903 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ercc1P07903 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ercc1P07903 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ercc1P07903 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc1P07903 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc1P07903 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc1P07903 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc1P07903 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc1P07903 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc1P07903 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc1P07903 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ercc1P07903 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ercc1P07903 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc1P07903 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Ercc1P07903 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc1P07903 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc1P07903 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc1P07903 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms