Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Igh-VJ558P01758 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igh-VJ558P01758 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igh-VJ558P01758 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igh-VJ558P01758 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igh-VJ558P01758 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Igh-VJ558P01758 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.28■□□□□ 0.84
Igh-VJ558P01758 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Igh-VJ558P01758 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igh-VJ558P01758 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igh-VJ558P01758 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.26■□□□□ 0.83
Igh-VJ558P01758 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Igh-VJ558P01758 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igh-VJ558P01758 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.25■□□□□ 0.83
Igh-VJ558P01758 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Igh-VJ558P01758 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igh-VJ558P01758 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.23■□□□□ 0.83
Igh-VJ558P01758 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Igh-VJ558P01758 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igh-VJ558P01758 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igh-VJ558P01758 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igh-VJ558P01758 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igh-VJ558P01758 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Igh-VJ558P01758 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igh-VJ558P01758 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Igh-VJ558P01758 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igh-VJ558P01758 Gm6821-201ENSMUST00000107540 542 ntBASIC20.21■□□□□ 0.83
Igh-VJ558P01758 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Igh-VJ558P01758 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igh-VJ558P01758 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igh-VJ558P01758 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igh-VJ558P01758 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igh-VJ558P01758 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igh-VJ558P01758 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igh-VJ558P01758 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igh-VJ558P01758 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igh-VJ558P01758 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igh-VJ558P01758 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igh-VJ558P01758 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igh-VJ558P01758 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igh-VJ558P01758 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Igh-VJ558P01758 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igh-VJ558P01758 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igh-VJ558P01758 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Igh-VJ558P01758 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igh-VJ558P01758 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igh-VJ558P01758 Gm8503-201ENSMUST00000118131 455 ntBASIC20.14■□□□□ 0.81
Igh-VJ558P01758 Gm37136-201ENSMUST00000194368 194 ntBASIC20.14■□□□□ 0.81
Igh-VJ558P01758 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igh-VJ558P01758 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igh-VJ558P01758 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igh-VJ558P01758 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.13■□□□□ 0.81
Igh-VJ558P01758 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igh-VJ558P01758 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Igh-VJ558P01758 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Igh-VJ558P01758 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Igh-VJ558P01758 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.1■□□□□ 0.81
Igh-VJ558P01758 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igh-VJ558P01758 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igh-VJ558P01758 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igh-VJ558P01758 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igh-VJ558P01758 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igh-VJ558P01758 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Igh-VJ558P01758 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igh-VJ558P01758 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Igh-VJ558P01758 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Igh-VJ558P01758 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.08■□□□□ 0.81
Igh-VJ558P01758 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Igh-VJ558P01758 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Igh-VJ558P01758 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igh-VJ558P01758 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igh-VJ558P01758 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igh-VJ558P01758 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Igh-VJ558P01758 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Igh-VJ558P01758 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igh-VJ558P01758 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.06■□□□□ 0.8
Igh-VJ558P01758 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igh-VJ558P01758 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igh-VJ558P01758 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.05■□□□□ 0.8
Igh-VJ558P01758 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igh-VJ558P01758 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Igh-VJ558P01758 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igh-VJ558P01758 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igh-VJ558P01758 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igh-VJ558P01758 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Igh-VJ558P01758 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Igh-VJ558P01758 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igh-VJ558P01758 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igh-VJ558P01758 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Igh-VJ558P01758 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms