Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Syn1O88935 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Syn1O88935 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.43■■□□□ 1.5
Syn1O88935 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Syn1O88935 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.42■■□□□ 1.5
Syn1O88935 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Syn1O88935 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Syn1O88935 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Syn1O88935 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.4■■□□□ 1.5
Syn1O88935 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Syn1O88935 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Syn1O88935 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Syn1O88935 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Syn1O88935 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Syn1O88935 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.38■■□□□ 1.49
Syn1O88935 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.38■■□□□ 1.49
Syn1O88935 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Syn1O88935 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Syn1O88935 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Syn1O88935 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Syn1O88935 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.37■■□□□ 1.49
Syn1O88935 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.37■■□□□ 1.49
Syn1O88935 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Syn1O88935 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Syn1O88935 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Syn1O88935 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Syn1O88935 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Syn1O88935 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.36■■□□□ 1.49
Syn1O88935 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Syn1O88935 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Syn1O88935 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Syn1O88935 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.35■■□□□ 1.49
Syn1O88935 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Syn1O88935 Rps24-207ENSMUST00000224568 714 ntBASIC24.34■■□□□ 1.49
Syn1O88935 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Syn1O88935 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Syn1O88935 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Syn1O88935 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Syn1O88935 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Syn1O88935 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Syn1O88935 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Syn1O88935 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Syn1O88935 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.3■■□□□ 1.48
Syn1O88935 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.29■■□□□ 1.48
Syn1O88935 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Syn1O88935 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Syn1O88935 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Syn1O88935 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Syn1O88935 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Syn1O88935 Gm15820-201ENSMUST00000201566 728 ntBASIC24.27■■□□□ 1.48
Syn1O88935 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Syn1O88935 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.27■■□□□ 1.48
Syn1O88935 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Syn1O88935 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.26■■□□□ 1.47
Syn1O88935 Gm37136-201ENSMUST00000194368 194 ntBASIC24.26■■□□□ 1.47
Syn1O88935 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.25■■□□□ 1.47
Syn1O88935 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.25■■□□□ 1.47
Syn1O88935 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Syn1O88935 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Syn1O88935 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
Syn1O88935 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Syn1O88935 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Syn1O88935 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Syn1O88935 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Syn1O88935 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Syn1O88935 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.22■■□□□ 1.47
Syn1O88935 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Syn1O88935 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Syn1O88935 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Syn1O88935 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.2■■□□□ 1.46
Syn1O88935 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Syn1O88935 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Syn1O88935 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Syn1O88935 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.18■■□□□ 1.46
Syn1O88935 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Syn1O88935 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Syn1O88935 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.17■■□□□ 1.46
Syn1O88935 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Syn1O88935 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Syn1O88935 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Syn1O88935 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Syn1O88935 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Syn1O88935 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.15■■□□□ 1.46
Syn1O88935 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Syn1O88935 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Syn1O88935 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.15■■□□□ 1.46
Syn1O88935 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Syn1O88935 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.15■■□□□ 1.46
Syn1O88935 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Syn1O88935 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.14■■□□□ 1.45
Syn1O88935 Gm14117-201ENSMUST00000122417 843 ntBASIC24.14■■□□□ 1.45
Syn1O88935 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.14■■□□□ 1.45
Syn1O88935 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Syn1O88935 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.14■■□□□ 1.45
Syn1O88935 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Syn1O88935 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Syn1O88935 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Syn1O88935 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.13■■□□□ 1.45
Syn1O88935 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Syn1O88935 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms