Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.35■■□□□ 1.81
Becn1O88597 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Becn1O88597 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Becn1O88597 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Becn1O88597 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Becn1O88597 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Becn1O88597 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Becn1O88597 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Becn1O88597 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Becn1O88597 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Becn1O88597 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Becn1O88597 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Becn1O88597 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Becn1O88597 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Becn1O88597 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Becn1O88597 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Becn1O88597 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Becn1O88597 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Becn1O88597 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Becn1O88597 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Becn1O88597 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Becn1O88597 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Becn1O88597 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.3■■□□□ 1.8
Becn1O88597 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Becn1O88597 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Becn1O88597 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Becn1O88597 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Becn1O88597 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Becn1O88597 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Becn1O88597 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Becn1O88597 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Becn1O88597 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Becn1O88597 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC26.28■■□□□ 1.8
Becn1O88597 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Becn1O88597 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Becn1O88597 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Becn1O88597 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Becn1O88597 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Becn1O88597 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Becn1O88597 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Becn1O88597 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Becn1O88597 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Becn1O88597 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Becn1O88597 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.24■■□□□ 1.79
Becn1O88597 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Becn1O88597 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Becn1O88597 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Becn1O88597 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Becn1O88597 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Becn1O88597 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.23■■□□□ 1.79
Becn1O88597 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Becn1O88597 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Becn1O88597 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Becn1O88597 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Becn1O88597 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Becn1O88597 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC26.2■■□□□ 1.78
Becn1O88597 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Becn1O88597 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Becn1O88597 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Becn1O88597 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Becn1O88597 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Becn1O88597 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Becn1O88597 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Becn1O88597 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Becn1O88597 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Becn1O88597 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Becn1O88597 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Becn1O88597 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Becn1O88597 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Becn1O88597 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Becn1O88597 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Becn1O88597 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Becn1O88597 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Becn1O88597 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Becn1O88597 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Becn1O88597 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Becn1O88597 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Becn1O88597 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Becn1O88597 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.13■■□□□ 1.77
Becn1O88597 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Becn1O88597 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC26.12■■□□□ 1.77
Becn1O88597 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
Becn1O88597 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Becn1O88597 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC26.11■■□□□ 1.77
Becn1O88597 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Becn1O88597 Gm6277-202ENSMUST00000224036 2779 ntBASIC26.1■■□□□ 1.77
Becn1O88597 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Becn1O88597 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Becn1O88597 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
Becn1O88597 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Becn1O88597 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Becn1O88597 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
Becn1O88597 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Becn1O88597 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Becn1O88597 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Becn1O88597 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Becn1O88597 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Becn1O88597 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Becn1O88597 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Becn1O88597 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms