Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops3O88543 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops3O88543 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops3O88543 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops3O88543 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.71■□□□□ 0.91
Cops3O88543 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops3O88543 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops3O88543 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops3O88543 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops3O88543 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cops3O88543 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cops3O88543 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.7■□□□□ 0.9
Cops3O88543 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cops3O88543 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cops3O88543 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.69■□□□□ 0.9
Cops3O88543 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.69■□□□□ 0.9
Cops3O88543 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cops3O88543 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cops3O88543 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cops3O88543 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops3O88543 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cops3O88543 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops3O88543 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops3O88543 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cops3O88543 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cops3O88543 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cops3O88543 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cops3O88543 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops3O88543 Gm45855-201ENSMUST00000212546 880 ntBASIC20.65■□□□□ 0.9
Cops3O88543 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cops3O88543 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cops3O88543 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cops3O88543 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cops3O88543 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cops3O88543 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.63■□□□□ 0.89
Cops3O88543 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops3O88543 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops3O88543 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cops3O88543 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops3O88543 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops3O88543 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops3O88543 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.61■□□□□ 0.89
Cops3O88543 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.61■□□□□ 0.89
Cops3O88543 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cops3O88543 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops3O88543 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cops3O88543 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cops3O88543 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cops3O88543 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cops3O88543 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cops3O88543 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cops3O88543 Particl-201ENSMUST00000205370 1560 ntBASIC20.59■□□□□ 0.89
Cops3O88543 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cops3O88543 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cops3O88543 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cops3O88543 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cops3O88543 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.57■□□□□ 0.88
Cops3O88543 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cops3O88543 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cops3O88543 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cops3O88543 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Cops3O88543 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.56■□□□□ 0.88
Cops3O88543 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cops3O88543 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.56■□□□□ 0.88
Cops3O88543 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cops3O88543 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops3O88543 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cops3O88543 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops3O88543 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops3O88543 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cops3O88543 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cops3O88543 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cops3O88543 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cops3O88543 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops3O88543 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cops3O88543 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cops3O88543 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cops3O88543 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Cops3O88543 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cops3O88543 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cops3O88543 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops3O88543 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cops3O88543 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cops3O88543 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cops3O88543 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cops3O88543 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cops3O88543 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cops3O88543 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cops3O88543 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cops3O88543 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cops3O88543 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cops3O88543 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cops3O88543 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cops3O88543 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cops3O88543 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cops3O88543 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cops3O88543 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cops3O88543 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cops3O88543 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cops3O88543 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms