Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.7■■□□□ 1.38
Cacna1hO88427 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cacna1hO88427 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cacna1hO88427 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cacna1hO88427 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Cacna1hO88427 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.69■■□□□ 1.38
Cacna1hO88427 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cacna1hO88427 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cacna1hO88427 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cacna1hO88427 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cacna1hO88427 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cacna1hO88427 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Cacna1hO88427 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cacna1hO88427 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Cacna1hO88427 Gm14117-201ENSMUST00000122417 843 ntBASIC23.65■■□□□ 1.38
Cacna1hO88427 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Cacna1hO88427 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.63■■□□□ 1.37
Cacna1hO88427 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Cacna1hO88427 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cacna1hO88427 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cacna1hO88427 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.62■■□□□ 1.37
Cacna1hO88427 Gm9959-201ENSMUST00000068277 390 ntBASIC23.61■■□□□ 1.37
Cacna1hO88427 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cacna1hO88427 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Cacna1hO88427 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.6■■□□□ 1.37
Cacna1hO88427 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cacna1hO88427 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cacna1hO88427 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.59■■□□□ 1.37
Cacna1hO88427 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cacna1hO88427 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cacna1hO88427 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cacna1hO88427 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cacna1hO88427 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cacna1hO88427 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.57■■□□□ 1.36
Cacna1hO88427 Gm13238-201ENSMUST00000117655 780 ntBASIC23.57■■□□□ 1.36
Cacna1hO88427 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cacna1hO88427 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cacna1hO88427 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cacna1hO88427 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
Cacna1hO88427 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.56■■□□□ 1.36
Cacna1hO88427 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cacna1hO88427 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.55■■□□□ 1.36
Cacna1hO88427 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Cacna1hO88427 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cacna1hO88427 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.52■■□□□ 1.36
Cacna1hO88427 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Cacna1hO88427 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Cacna1hO88427 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Cacna1hO88427 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Cacna1hO88427 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cacna1hO88427 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Cacna1hO88427 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cacna1hO88427 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Cacna1hO88427 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.5■■□□□ 1.35
Cacna1hO88427 Gm43566-201ENSMUST00000196851 808 ntBASIC23.5■■□□□ 1.35
Cacna1hO88427 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cacna1hO88427 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Cacna1hO88427 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.48■■□□□ 1.35
Cacna1hO88427 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cacna1hO88427 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.47■■□□□ 1.35
Cacna1hO88427 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cacna1hO88427 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cacna1hO88427 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cacna1hO88427 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cacna1hO88427 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Cacna1hO88427 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Cacna1hO88427 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.45■■□□□ 1.35
Cacna1hO88427 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.45■■□□□ 1.35
Cacna1hO88427 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
Cacna1hO88427 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cacna1hO88427 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cacna1hO88427 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.44■■□□□ 1.34
Cacna1hO88427 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.44■■□□□ 1.34
Cacna1hO88427 Gm37136-201ENSMUST00000194368 194 ntBASIC23.43■■□□□ 1.34
Cacna1hO88427 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cacna1hO88427 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Cacna1hO88427 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Cacna1hO88427 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cacna1hO88427 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cacna1hO88427 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cacna1hO88427 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cacna1hO88427 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cacna1hO88427 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Cacna1hO88427 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cacna1hO88427 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.41■■□□□ 1.34
Cacna1hO88427 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Cacna1hO88427 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cacna1hO88427 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
Cacna1hO88427 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cacna1hO88427 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cacna1hO88427 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Cacna1hO88427 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.4■■□□□ 1.34
Cacna1hO88427 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.4■■□□□ 1.34
Cacna1hO88427 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Cacna1hO88427 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cacna1hO88427 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Cacna1hO88427 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.39■■□□□ 1.33
Cacna1hO88427 Gm45444-201ENSMUST00000211394 898 ntBASIC23.39■■□□□ 1.33
Cacna1hO88427 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cacna1hO88427 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 151.7 ms