Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Tulp3O88413 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Tulp3O88413 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tulp3O88413 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.65■■□□□ 1.06
Tulp3O88413 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tulp3O88413 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.63■■□□□ 1.05
Tulp3O88413 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.63■■□□□ 1.05
Tulp3O88413 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tulp3O88413 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Tulp3O88413 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tulp3O88413 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tulp3O88413 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tulp3O88413 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.6■■□□□ 1.05
Tulp3O88413 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.6■■□□□ 1.05
Tulp3O88413 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.6■■□□□ 1.05
Tulp3O88413 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tulp3O88413 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Tulp3O88413 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.59■■□□□ 1.05
Tulp3O88413 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Tulp3O88413 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Tulp3O88413 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tulp3O88413 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tulp3O88413 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tulp3O88413 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tulp3O88413 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tulp3O88413 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tulp3O88413 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.57■■□□□ 1.04
Tulp3O88413 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tulp3O88413 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Tulp3O88413 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tulp3O88413 Particl-201ENSMUST00000205370 1560 ntBASIC21.56■■□□□ 1.04
Tulp3O88413 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tulp3O88413 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tulp3O88413 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.55■■□□□ 1.04
Tulp3O88413 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tulp3O88413 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Tulp3O88413 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Tulp3O88413 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Tulp3O88413 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tulp3O88413 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Tulp3O88413 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.53■■□□□ 1.04
Tulp3O88413 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tulp3O88413 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tulp3O88413 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tulp3O88413 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tulp3O88413 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tulp3O88413 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tulp3O88413 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.51■■□□□ 1.03
Tulp3O88413 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tulp3O88413 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tulp3O88413 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tulp3O88413 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tulp3O88413 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tulp3O88413 Zfp131-205ENSMUST00000223812 663 ntBASIC21.49■■□□□ 1.03
Tulp3O88413 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tulp3O88413 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tulp3O88413 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.49■■□□□ 1.03
Tulp3O88413 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Tulp3O88413 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tulp3O88413 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tulp3O88413 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tulp3O88413 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.48■■□□□ 1.03
Tulp3O88413 Gm30023-201ENSMUST00000197970 889 ntBASIC21.48■■□□□ 1.03
Tulp3O88413 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tulp3O88413 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tulp3O88413 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.47■■□□□ 1.03
Tulp3O88413 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tulp3O88413 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.46■■□□□ 1.03
Tulp3O88413 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tulp3O88413 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tulp3O88413 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tulp3O88413 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Tulp3O88413 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tulp3O88413 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tulp3O88413 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tulp3O88413 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.44■■□□□ 1.02
Tulp3O88413 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tulp3O88413 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tulp3O88413 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tulp3O88413 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.43■■□□□ 1.02
Tulp3O88413 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tulp3O88413 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tulp3O88413 Gm24970-201ENSMUST00000175582 82 ntBASIC21.42■■□□□ 1.02
Tulp3O88413 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tulp3O88413 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tulp3O88413 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tulp3O88413 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tulp3O88413 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tulp3O88413 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tulp3O88413 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tulp3O88413 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
Tulp3O88413 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tulp3O88413 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Tulp3O88413 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tulp3O88413 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.4■■□□□ 1.02
Tulp3O88413 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tulp3O88413 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.39■■□□□ 1.02
Tulp3O88413 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.39■■□□□ 1.02
Tulp3O88413 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Tulp3O88413 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms