Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rdh5O55240 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rdh5O55240 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.01■■□□□ 1.11
Rdh5O55240 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rdh5O55240 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Rdh5O55240 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rdh5O55240 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Rdh5O55240 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rdh5O55240 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rdh5O55240 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22■■□□□ 1.11
Rdh5O55240 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22■■□□□ 1.11
Rdh5O55240 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rdh5O55240 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rdh5O55240 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rdh5O55240 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Rdh5O55240 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rdh5O55240 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rdh5O55240 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rdh5O55240 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rdh5O55240 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rdh5O55240 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rdh5O55240 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rdh5O55240 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rdh5O55240 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rdh5O55240 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rdh5O55240 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rdh5O55240 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rdh5O55240 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rdh5O55240 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
Rdh5O55240 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rdh5O55240 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rdh5O55240 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Rdh5O55240 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rdh5O55240 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rdh5O55240 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rdh5O55240 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rdh5O55240 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rdh5O55240 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rdh5O55240 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rdh5O55240 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.88■■□□□ 1.09
Rdh5O55240 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rdh5O55240 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rdh5O55240 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rdh5O55240 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Rdh5O55240 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rdh5O55240 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rdh5O55240 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.87■■□□□ 1.09
Rdh5O55240 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rdh5O55240 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rdh5O55240 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rdh5O55240 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rdh5O55240 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rdh5O55240 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rdh5O55240 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rdh5O55240 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rdh5O55240 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Rdh5O55240 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rdh5O55240 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rdh5O55240 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rdh5O55240 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rdh5O55240 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Rdh5O55240 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rdh5O55240 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rdh5O55240 Gm7432-201ENSMUST00000210343 879 ntBASIC21.83■■□□□ 1.09
Rdh5O55240 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rdh5O55240 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rdh5O55240 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rdh5O55240 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Rdh5O55240 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rdh5O55240 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rdh5O55240 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rdh5O55240 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rdh5O55240 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rdh5O55240 Gm37136-201ENSMUST00000194368 194 ntBASIC21.81■■□□□ 1.08
Rdh5O55240 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rdh5O55240 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rdh5O55240 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rdh5O55240 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rdh5O55240 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.79■■□□□ 1.08
Rdh5O55240 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rdh5O55240 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Rdh5O55240 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rdh5O55240 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rdh5O55240 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rdh5O55240 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rdh5O55240 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rdh5O55240 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rdh5O55240 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rdh5O55240 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rdh5O55240 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.75■■□□□ 1.07
Rdh5O55240 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
Rdh5O55240 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Rdh5O55240 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
Rdh5O55240 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.74■■□□□ 1.07
Rdh5O55240 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rdh5O55240 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rdh5O55240 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rdh5O55240 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.73■■□□□ 1.07
Rdh5O55240 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rdh5O55240 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms