Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl13O55038 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl13O55038 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcl13O55038 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcl13O55038 Scarna2-201ENSMUST00000157560 414 ntBASIC19.88■□□□□ 0.77
Cxcl13O55038 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cxcl13O55038 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.88■□□□□ 0.77
Cxcl13O55038 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcl13O55038 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.86■□□□□ 0.77
Cxcl13O55038 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.86■□□□□ 0.77
Cxcl13O55038 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcl13O55038 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcl13O55038 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.86■□□□□ 0.77
Cxcl13O55038 Gm9806-201ENSMUST00000051080 552 ntBASIC19.85■□□□□ 0.77
Cxcl13O55038 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl13O55038 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.84■□□□□ 0.77
Cxcl13O55038 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl13O55038 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl13O55038 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl13O55038 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcl13O55038 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.83■□□□□ 0.77
Cxcl13O55038 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cxcl13O55038 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cxcl13O55038 Gm11687-201ENSMUST00000118911 886 ntBASIC19.83■□□□□ 0.77
Cxcl13O55038 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cxcl13O55038 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.83■□□□□ 0.77
Cxcl13O55038 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.83■□□□□ 0.76
Cxcl13O55038 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcl13O55038 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.82■□□□□ 0.76
Cxcl13O55038 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcl13O55038 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cxcl13O55038 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcl13O55038 Gm16437-201ENSMUST00000025669 507 ntBASIC19.8■□□□□ 0.76
Cxcl13O55038 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcl13O55038 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl13O55038 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl13O55038 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl13O55038 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl13O55038 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl13O55038 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl13O55038 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cxcl13O55038 Cap2-205ENSMUST00000225824 1634 ntBASIC19.79■□□□□ 0.76
Cxcl13O55038 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.78■□□□□ 0.76
Cxcl13O55038 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cxcl13O55038 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.77■□□□□ 0.76
Cxcl13O55038 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.77■□□□□ 0.76
Cxcl13O55038 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.77■□□□□ 0.76
Cxcl13O55038 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cxcl13O55038 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cxcl13O55038 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cxcl13O55038 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl13O55038 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.75■□□□□ 0.75
Cxcl13O55038 Gm9812-201ENSMUST00000061934 968 ntBASIC19.75■□□□□ 0.75
Cxcl13O55038 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cxcl13O55038 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cxcl13O55038 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cxcl13O55038 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cxcl13O55038 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.71■□□□□ 0.75
Cxcl13O55038 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl13O55038 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.71■□□□□ 0.75
Cxcl13O55038 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.71■□□□□ 0.75
Cxcl13O55038 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl13O55038 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl13O55038 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl13O55038 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cxcl13O55038 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.7■□□□□ 0.74
Cxcl13O55038 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cxcl13O55038 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cxcl13O55038 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.69■□□□□ 0.74
Cxcl13O55038 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.69■□□□□ 0.74
Cxcl13O55038 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.69■□□□□ 0.74
Cxcl13O55038 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cxcl13O55038 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cxcl13O55038 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cxcl13O55038 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cxcl13O55038 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cxcl13O55038 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cxcl13O55038 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cxcl13O55038 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.67■□□□□ 0.74
Cxcl13O55038 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cxcl13O55038 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cxcl13O55038 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cxcl13O55038 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.66■□□□□ 0.74
Cxcl13O55038 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cxcl13O55038 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cxcl13O55038 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.65■□□□□ 0.74
Cxcl13O55038 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cxcl13O55038 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cxcl13O55038 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cxcl13O55038 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cxcl13O55038 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cxcl13O55038 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.65■□□□□ 0.74
Cxcl13O55038 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.65■□□□□ 0.74
Cxcl13O55038 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cxcl13O55038 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.64■□□□□ 0.73
Cxcl13O55038 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cxcl13O55038 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cxcl13O55038 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cxcl13O55038 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cxcl13O55038 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms