Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DffbO54788 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DffbO54788 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
DffbO54788 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DffbO54788 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
DffbO54788 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DffbO54788 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DffbO54788 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DffbO54788 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DffbO54788 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DffbO54788 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DffbO54788 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DffbO54788 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
DffbO54788 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DffbO54788 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.8■□□□□ 0.76
DffbO54788 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DffbO54788 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DffbO54788 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.79■□□□□ 0.76
DffbO54788 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.79■□□□□ 0.76
DffbO54788 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
DffbO54788 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DffbO54788 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DffbO54788 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DffbO54788 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.78■□□□□ 0.76
DffbO54788 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DffbO54788 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DffbO54788 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.77■□□□□ 0.76
DffbO54788 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.77■□□□□ 0.76
DffbO54788 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.77■□□□□ 0.76
DffbO54788 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DffbO54788 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
DffbO54788 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DffbO54788 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DffbO54788 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
DffbO54788 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DffbO54788 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DffbO54788 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DffbO54788 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DffbO54788 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.74■□□□□ 0.75
DffbO54788 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DffbO54788 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DffbO54788 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DffbO54788 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DffbO54788 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DffbO54788 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DffbO54788 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DffbO54788 Gm45855-201ENSMUST00000212546 880 ntBASIC19.72■□□□□ 0.75
DffbO54788 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DffbO54788 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DffbO54788 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DffbO54788 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DffbO54788 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.7■□□□□ 0.74
DffbO54788 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
DffbO54788 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DffbO54788 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
DffbO54788 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DffbO54788 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DffbO54788 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DffbO54788 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DffbO54788 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.68■□□□□ 0.74
DffbO54788 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DffbO54788 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DffbO54788 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DffbO54788 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DffbO54788 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DffbO54788 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
DffbO54788 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DffbO54788 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
DffbO54788 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
DffbO54788 Particl-201ENSMUST00000205370 1560 ntBASIC19.67■□□□□ 0.74
DffbO54788 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
DffbO54788 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DffbO54788 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DffbO54788 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DffbO54788 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DffbO54788 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
DffbO54788 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
DffbO54788 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.65■□□□□ 0.74
DffbO54788 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.74
DffbO54788 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DffbO54788 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
DffbO54788 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DffbO54788 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DffbO54788 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
DffbO54788 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.64■□□□□ 0.73
DffbO54788 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DffbO54788 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
DffbO54788 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
DffbO54788 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DffbO54788 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DffbO54788 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DffbO54788 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DffbO54788 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.63■□□□□ 0.73
DffbO54788 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DffbO54788 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DffbO54788 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DffbO54788 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DffbO54788 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DffbO54788 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DffbO54788 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms