Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Abca4O35600 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Abca4O35600 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Abca4O35600 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Abca4O35600 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Abca4O35600 Gm30023-201ENSMUST00000197970 889 ntBASIC22.91■■□□□ 1.26
Abca4O35600 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Abca4O35600 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Abca4O35600 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Abca4O35600 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Abca4O35600 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Abca4O35600 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Abca4O35600 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Abca4O35600 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Abca4O35600 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Abca4O35600 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Abca4O35600 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Abca4O35600 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Abca4O35600 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Abca4O35600 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Abca4O35600 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Abca4O35600 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Abca4O35600 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Abca4O35600 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.85■■□□□ 1.25
Abca4O35600 Gm13238-201ENSMUST00000117655 780 ntBASIC22.85■■□□□ 1.25
Abca4O35600 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Abca4O35600 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Abca4O35600 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Abca4O35600 Gm43566-201ENSMUST00000196851 808 ntBASIC22.83■■□□□ 1.25
Abca4O35600 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Abca4O35600 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.82■■□□□ 1.24
Abca4O35600 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Abca4O35600 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Abca4O35600 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Abca4O35600 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.82■■□□□ 1.24
Abca4O35600 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Abca4O35600 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Abca4O35600 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Abca4O35600 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Abca4O35600 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Abca4O35600 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Abca4O35600 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Abca4O35600 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Abca4O35600 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Abca4O35600 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.77■■□□□ 1.24
Abca4O35600 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
Abca4O35600 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Abca4O35600 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Abca4O35600 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Abca4O35600 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.75■■□□□ 1.23
Abca4O35600 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.75■■□□□ 1.23
Abca4O35600 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.75■■□□□ 1.23
Abca4O35600 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Abca4O35600 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Abca4O35600 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Abca4O35600 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Abca4O35600 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Abca4O35600 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.74■■□□□ 1.23
Abca4O35600 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.73■■□□□ 1.23
Abca4O35600 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.73■■□□□ 1.23
Abca4O35600 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Abca4O35600 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Abca4O35600 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Abca4O35600 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Abca4O35600 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Abca4O35600 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Abca4O35600 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Abca4O35600 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
Abca4O35600 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Abca4O35600 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.71■■□□□ 1.23
Abca4O35600 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Abca4O35600 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.7■■□□□ 1.22
Abca4O35600 Gm45444-201ENSMUST00000211394 898 ntBASIC22.7■■□□□ 1.22
Abca4O35600 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Abca4O35600 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Abca4O35600 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Abca4O35600 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Abca4O35600 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
Abca4O35600 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Abca4O35600 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Abca4O35600 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.68■■□□□ 1.22
Abca4O35600 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Abca4O35600 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Abca4O35600 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Abca4O35600 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Abca4O35600 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.65■■□□□ 1.22
Abca4O35600 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Abca4O35600 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Abca4O35600 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.65■■□□□ 1.22
Abca4O35600 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Abca4O35600 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Abca4O35600 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.64■■□□□ 1.21
Abca4O35600 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Abca4O35600 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Abca4O35600 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Abca4O35600 Gm37136-201ENSMUST00000194368 194 ntBASIC22.63■■□□□ 1.21
Abca4O35600 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Abca4O35600 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.63■■□□□ 1.21
Abca4O35600 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Abca4O35600 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms