Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Zfp131-205ENSMUST00000223812 663 ntBASIC20.77■□□□□ 0.92
Alx4O35137 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Alx4O35137 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Alx4O35137 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Alx4O35137 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx4O35137 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx4O35137 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx4O35137 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx4O35137 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Alx4O35137 Gm30023-201ENSMUST00000197970 889 ntBASIC20.75■□□□□ 0.91
Alx4O35137 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Alx4O35137 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.75■□□□□ 0.91
Alx4O35137 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Alx4O35137 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Alx4O35137 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Alx4O35137 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Alx4O35137 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Alx4O35137 Gm24970-201ENSMUST00000175582 82 ntBASIC20.73■□□□□ 0.91
Alx4O35137 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.73■□□□□ 0.91
Alx4O35137 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alx4O35137 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alx4O35137 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx4O35137 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Alx4O35137 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx4O35137 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.72■□□□□ 0.91
Alx4O35137 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Alx4O35137 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Alx4O35137 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alx4O35137 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Alx4O35137 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Alx4O35137 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.71■□□□□ 0.91
Alx4O35137 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx4O35137 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alx4O35137 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx4O35137 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx4O35137 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Alx4O35137 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alx4O35137 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx4O35137 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Alx4O35137 Gm9397-201ENSMUST00000200125 605 ntBASIC20.67■□□□□ 0.9
Alx4O35137 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Alx4O35137 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.67■□□□□ 0.9
Alx4O35137 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx4O35137 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Alx4O35137 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx4O35137 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx4O35137 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx4O35137 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.65■□□□□ 0.9
Alx4O35137 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Alx4O35137 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.65■□□□□ 0.9
Alx4O35137 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Alx4O35137 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Alx4O35137 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Alx4O35137 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Alx4O35137 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Alx4O35137 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.62■□□□□ 0.89
Alx4O35137 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Alx4O35137 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Alx4O35137 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Alx4O35137 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Alx4O35137 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.6■□□□□ 0.89
Alx4O35137 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Alx4O35137 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Alx4O35137 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Alx4O35137 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Alx4O35137 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Alx4O35137 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.58■□□□□ 0.89
Alx4O35137 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Alx4O35137 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Alx4O35137 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.58■□□□□ 0.88
Alx4O35137 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Alx4O35137 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alx4O35137 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Alx4O35137 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Alx4O35137 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Alx4O35137 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Alx4O35137 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Alx4O35137 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alx4O35137 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alx4O35137 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alx4O35137 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Alx4O35137 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Alx4O35137 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Alx4O35137 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alx4O35137 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Alx4O35137 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.55■□□□□ 0.88
Alx4O35137 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.55■□□□□ 0.88
Alx4O35137 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Alx4O35137 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx4O35137 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx4O35137 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Alx4O35137 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.53■□□□□ 0.88
Alx4O35137 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx4O35137 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx4O35137 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.53■□□□□ 0.88
Alx4O35137 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alx4O35137 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.52■□□□□ 0.88
Alx4O35137 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Alx4O35137 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Alx4O35137 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms