Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Sh2b3O09039 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2b3O09039 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.6■□□□□ 0.89
Sh2b3O09039 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2b3O09039 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.59■□□□□ 0.89
Sh2b3O09039 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh2b3O09039 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh2b3O09039 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh2b3O09039 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Sh2b3O09039 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2b3O09039 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.56■□□□□ 0.88
Sh2b3O09039 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2b3O09039 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2b3O09039 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2b3O09039 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sh2b3O09039 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sh2b3O09039 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sh2b3O09039 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2b3O09039 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Sh2b3O09039 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sh2b3O09039 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2b3O09039 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2b3O09039 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2b3O09039 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2b3O09039 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2b3O09039 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.53■□□□□ 0.88
Sh2b3O09039 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2b3O09039 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2b3O09039 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Sh2b3O09039 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Sh2b3O09039 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2b3O09039 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2b3O09039 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2b3O09039 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Sh2b3O09039 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Sh2b3O09039 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.52■□□□□ 0.88
Sh2b3O09039 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Sh2b3O09039 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2b3O09039 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2b3O09039 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Sh2b3O09039 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2b3O09039 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sh2b3O09039 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2b3O09039 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2b3O09039 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2b3O09039 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Sh2b3O09039 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.49■□□□□ 0.87
Sh2b3O09039 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Sh2b3O09039 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2b3O09039 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2b3O09039 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2b3O09039 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.47■□□□□ 0.87
Sh2b3O09039 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.47■□□□□ 0.87
Sh2b3O09039 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2b3O09039 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.46■□□□□ 0.87
Sh2b3O09039 Cap2-205ENSMUST00000225824 1634 ntBASIC20.45■□□□□ 0.87
Sh2b3O09039 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh2b3O09039 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.44■□□□□ 0.86
Sh2b3O09039 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2b3O09039 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Sh2b3O09039 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sh2b3O09039 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2b3O09039 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Sh2b3O09039 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2b3O09039 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2b3O09039 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Sh2b3O09039 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Sh2b3O09039 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2b3O09039 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2b3O09039 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2b3O09039 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2b3O09039 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2b3O09039 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.41■□□□□ 0.86
Sh2b3O09039 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2b3O09039 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.41■□□□□ 0.86
Sh2b3O09039 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh2b3O09039 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sh2b3O09039 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.38■□□□□ 0.85
Sh2b3O09039 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Sh2b3O09039 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2b3O09039 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2b3O09039 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2b3O09039 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2b3O09039 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2b3O09039 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2b3O09039 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2b3O09039 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2b3O09039 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2b3O09039 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh2b3O09039 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh2b3O09039 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.36■□□□□ 0.85
Sh2b3O09039 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Sh2b3O09039 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.35■□□□□ 0.85
Sh2b3O09039 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Sh2b3O09039 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh2b3O09039 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.34■□□□□ 0.85
Sh2b3O09039 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh2b3O09039 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh2b3O09039 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Sh2b3O09039 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms