Protein–RNA interactions for Protein: O08792

Ebf2, Transcription factor COE2, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf2O08792 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ebf2O08792 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ebf2O08792 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ebf2O08792 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Ebf2O08792 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ebf2O08792 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ebf2O08792 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ebf2O08792 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ebf2O08792 Gm30023-201ENSMUST00000197970 889 ntBASIC23.79■■□□□ 1.4
Ebf2O08792 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Ebf2O08792 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ebf2O08792 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ebf2O08792 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ebf2O08792 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Ebf2O08792 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ebf2O08792 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ebf2O08792 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.77■■□□□ 1.4
Ebf2O08792 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ebf2O08792 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Ebf2O08792 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ebf2O08792 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ebf2O08792 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ebf2O08792 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ebf2O08792 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ebf2O08792 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ebf2O08792 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ebf2O08792 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ebf2O08792 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ebf2O08792 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Ebf2O08792 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ebf2O08792 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ebf2O08792 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ebf2O08792 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Ebf2O08792 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ebf2O08792 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ebf2O08792 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ebf2O08792 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ebf2O08792 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ebf2O08792 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ebf2O08792 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ebf2O08792 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ebf2O08792 Gm11175-201ENSMUST00000116172 543 ntBASIC23.69■■□□□ 1.38
Ebf2O08792 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ebf2O08792 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.69■■□□□ 1.38
Ebf2O08792 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.69■■□□□ 1.38
Ebf2O08792 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.69■■□□□ 1.38
Ebf2O08792 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ebf2O08792 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ebf2O08792 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.69■■□□□ 1.38
Ebf2O08792 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ebf2O08792 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ebf2O08792 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.68■■□□□ 1.38
Ebf2O08792 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Ebf2O08792 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ebf2O08792 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ebf2O08792 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ebf2O08792 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ebf2O08792 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ebf2O08792 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ebf2O08792 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.66■■□□□ 1.38
Ebf2O08792 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ebf2O08792 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ebf2O08792 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ebf2O08792 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ebf2O08792 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ebf2O08792 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ebf2O08792 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ebf2O08792 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.63■■□□□ 1.37
Ebf2O08792 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Ebf2O08792 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ebf2O08792 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ebf2O08792 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Ebf2O08792 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.62■■□□□ 1.37
Ebf2O08792 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ebf2O08792 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ebf2O08792 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ebf2O08792 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Ebf2O08792 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.6■■□□□ 1.37
Ebf2O08792 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.6■■□□□ 1.37
Ebf2O08792 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ebf2O08792 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ebf2O08792 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.58■■□□□ 1.37
Ebf2O08792 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ebf2O08792 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Ebf2O08792 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ebf2O08792 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ebf2O08792 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Ebf2O08792 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Ebf2O08792 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.56■■□□□ 1.36
Ebf2O08792 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ebf2O08792 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ebf2O08792 Particl-201ENSMUST00000205370 1560 ntBASIC23.56■■□□□ 1.36
Ebf2O08792 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ebf2O08792 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ebf2O08792 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.55■■□□□ 1.36
Ebf2O08792 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ebf2O08792 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ebf2O08792 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ebf2O08792 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ebf2O08792 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms