Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3727J3QM54 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3727J3QM54 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3727J3QM54 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Gm3727J3QM54 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3727J3QM54 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Gm3727J3QM54 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3727J3QM54 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3727J3QM54 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3727J3QM54 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3727J3QM54 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm3727J3QM54 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3727J3QM54 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3727J3QM54 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3727J3QM54 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.71■□□□□ 0.75
Gm3727J3QM54 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3727J3QM54 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3727J3QM54 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gm3727J3QM54 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3727J3QM54 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gm3727J3QM54 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3727J3QM54 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3727J3QM54 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3727J3QM54 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3727J3QM54 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3727J3QM54 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3727J3QM54 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.7■□□□□ 0.74
Gm3727J3QM54 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.7■□□□□ 0.74
Gm3727J3QM54 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gm3727J3QM54 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Gm3727J3QM54 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3727J3QM54 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3727J3QM54 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3727J3QM54 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3727J3QM54 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gm3727J3QM54 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3727J3QM54 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Gm3727J3QM54 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3727J3QM54 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3727J3QM54 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Gm3727J3QM54 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3727J3QM54 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3727J3QM54 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3727J3QM54 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.66■□□□□ 0.74
Gm3727J3QM54 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3727J3QM54 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3727J3QM54 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3727J3QM54 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gm3727J3QM54 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3727J3QM54 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm3727J3QM54 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3727J3QM54 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3727J3QM54 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3727J3QM54 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gm3727J3QM54 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gm3727J3QM54 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm3727J3QM54 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gm3727J3QM54 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Gm3727J3QM54 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Gm3727J3QM54 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3727J3QM54 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.64■□□□□ 0.73
Gm3727J3QM54 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Gm3727J3QM54 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm3727J3QM54 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm3727J3QM54 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3727J3QM54 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3727J3QM54 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3727J3QM54 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3727J3QM54 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3727J3QM54 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3727J3QM54 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3727J3QM54 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Gm3727J3QM54 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3727J3QM54 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.6■□□□□ 0.73
Gm3727J3QM54 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3727J3QM54 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gm3727J3QM54 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gm3727J3QM54 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3727J3QM54 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.59■□□□□ 0.73
Gm3727J3QM54 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3727J3QM54 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Gm3727J3QM54 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.58■□□□□ 0.73
Gm3727J3QM54 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm3727J3QM54 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Gm3727J3QM54 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm3727J3QM54 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm3727J3QM54 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3727J3QM54 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Gm3727J3QM54 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3727J3QM54 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3727J3QM54 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3727J3QM54 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3727J3QM54 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Gm3727J3QM54 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3727J3QM54 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3727J3QM54 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3727J3QM54 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3727J3QM54 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.55■□□□□ 0.72
Gm3727J3QM54 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3727J3QM54 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms