Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Pcdh17E9PXF0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdh17E9PXF0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh17E9PXF0 Mir3960-201ENSMUST00000198213 73 ntBASIC21.58■■□□□ 1.05
Pcdh17E9PXF0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh17E9PXF0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.58■■□□□ 1.05
Pcdh17E9PXF0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.58■■□□□ 1.04
Pcdh17E9PXF0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdh17E9PXF0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdh17E9PXF0 Scarna2-201ENSMUST00000157560 414 ntBASIC21.57■■□□□ 1.04
Pcdh17E9PXF0 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.57■■□□□ 1.04
Pcdh17E9PXF0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh17E9PXF0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Pcdh17E9PXF0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh17E9PXF0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh17E9PXF0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh17E9PXF0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh17E9PXF0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh17E9PXF0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh17E9PXF0 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.56■■□□□ 1.04
Pcdh17E9PXF0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh17E9PXF0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Pcdh17E9PXF0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdh17E9PXF0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh17E9PXF0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdh17E9PXF0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdh17E9PXF0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Pcdh17E9PXF0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh17E9PXF0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdh17E9PXF0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Pcdh17E9PXF0 Gm45364-201ENSMUST00000210883 159 ntBASIC21.53■■□□□ 1.04
Pcdh17E9PXF0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh17E9PXF0 Gm9806-201ENSMUST00000051080 552 ntBASIC21.53■■□□□ 1.04
Pcdh17E9PXF0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdh17E9PXF0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh17E9PXF0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh17E9PXF0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh17E9PXF0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh17E9PXF0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh17E9PXF0 Gm11687-201ENSMUST00000118911 886 ntBASIC21.5■■□□□ 1.03
Pcdh17E9PXF0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.5■■□□□ 1.03
Pcdh17E9PXF0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.5■■□□□ 1.03
Pcdh17E9PXF0 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.49■■□□□ 1.03
Pcdh17E9PXF0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdh17E9PXF0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh17E9PXF0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh17E9PXF0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh17E9PXF0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh17E9PXF0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh17E9PXF0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh17E9PXF0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh17E9PXF0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh17E9PXF0 Gm16437-201ENSMUST00000025669 507 ntBASIC21.46■■□□□ 1.03
Pcdh17E9PXF0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh17E9PXF0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Pcdh17E9PXF0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh17E9PXF0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh17E9PXF0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh17E9PXF0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh17E9PXF0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh17E9PXF0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.44■■□□□ 1.02
Pcdh17E9PXF0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdh17E9PXF0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh17E9PXF0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh17E9PXF0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh17E9PXF0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh17E9PXF0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh17E9PXF0 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.43■■□□□ 1.02
Pcdh17E9PXF0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh17E9PXF0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh17E9PXF0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh17E9PXF0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh17E9PXF0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh17E9PXF0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh17E9PXF0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.4■■□□□ 1.02
Pcdh17E9PXF0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Pcdh17E9PXF0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Pcdh17E9PXF0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdh17E9PXF0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh17E9PXF0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh17E9PXF0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh17E9PXF0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.38■■□□□ 1.01
Pcdh17E9PXF0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh17E9PXF0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.37■■□□□ 1.01
Pcdh17E9PXF0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.37■■□□□ 1.01
Pcdh17E9PXF0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh17E9PXF0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh17E9PXF0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh17E9PXF0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.36■■□□□ 1.01
Pcdh17E9PXF0 Gm12366-201ENSMUST00000121722 873 ntBASIC21.36■■□□□ 1.01
Pcdh17E9PXF0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdh17E9PXF0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.36■■□□□ 1.01
Pcdh17E9PXF0 Gm5786-201ENSMUST00000085368 882 ntBASIC21.36■■□□□ 1.01
Pcdh17E9PXF0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh17E9PXF0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.35■■□□□ 1.01
Pcdh17E9PXF0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcdh17E9PXF0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh17E9PXF0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh17E9PXF0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh17E9PXF0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms