Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
Ube2uB1AUC4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC34.51■■■■□ 3.12
Ube2uB1AUC4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Ube2uB1AUC4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Ube2uB1AUC4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Ube2uB1AUC4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Ube2uB1AUC4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC34.47■■■■□ 3.11
Ube2uB1AUC4 Mir3960-201ENSMUST00000198213 73 ntBASIC34.46■■■■□ 3.11
Ube2uB1AUC4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Ube2uB1AUC4 Mir6538-201ENSMUST00000183713 110 ntBASIC34.45■■■■□ 3.11
Ube2uB1AUC4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC34.45■■■■□ 3.1
Ube2uB1AUC4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC34.44■■■■□ 3.1
Ube2uB1AUC4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Ube2uB1AUC4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC34.43■■■■□ 3.1
Ube2uB1AUC4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Ube2uB1AUC4 Scarna2-201ENSMUST00000157560 414 ntBASIC34.42■■■■□ 3.1
Ube2uB1AUC4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Ube2uB1AUC4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Ube2uB1AUC4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Ube2uB1AUC4 Pkd1-207ENSMUST00000228550 1050 ntBASIC34.4■■■■□ 3.1
Ube2uB1AUC4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ube2uB1AUC4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ube2uB1AUC4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ube2uB1AUC4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ube2uB1AUC4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ube2uB1AUC4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Ube2uB1AUC4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC34.37■■■■□ 3.09
Ube2uB1AUC4 AC154454.1-201ENSMUST00000225253 216 ntBASIC34.37■■■■□ 3.09
Ube2uB1AUC4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Ube2uB1AUC4 Gm37847-201ENSMUST00000192163 1497 ntBASIC34.35■■■■□ 3.09
Ube2uB1AUC4 Gm31748-201ENSMUST00000194938 1497 ntBASIC34.35■■■■□ 3.09
Ube2uB1AUC4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Ube2uB1AUC4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Ube2uB1AUC4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC34.34■■■■□ 3.09
Ube2uB1AUC4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ube2uB1AUC4 Gm45364-201ENSMUST00000210883 159 ntBASIC34.33■■■■□ 3.09
Ube2uB1AUC4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC34.33■■■■□ 3.09
Ube2uB1AUC4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Ube2uB1AUC4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Ube2uB1AUC4 Gm16437-201ENSMUST00000025669 507 ntBASIC34.32■■■■□ 3.08
Ube2uB1AUC4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC34.32■■■■□ 3.08
Ube2uB1AUC4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
Ube2uB1AUC4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC34.3■■■■□ 3.08
Ube2uB1AUC4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC34.3■■■■□ 3.08
Ube2uB1AUC4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC34.3■■■■□ 3.08
Ube2uB1AUC4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC34.3■■■■□ 3.08
Ube2uB1AUC4 Gm13889-201ENSMUST00000099689 1386 ntBASIC34.29■■■■□ 3.08
Ube2uB1AUC4 Gm11687-201ENSMUST00000118911 886 ntBASIC34.29■■■■□ 3.08
Ube2uB1AUC4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Ube2uB1AUC4 Gm9806-201ENSMUST00000051080 552 ntBASIC34.29■■■■□ 3.08
Ube2uB1AUC4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Ube2uB1AUC4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Ube2uB1AUC4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
Ube2uB1AUC4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
Ube2uB1AUC4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Ube2uB1AUC4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
Ube2uB1AUC4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Ube2uB1AUC4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Ube2uB1AUC4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
Ube2uB1AUC4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC34.25■■■■□ 3.07
Ube2uB1AUC4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07
Ube2uB1AUC4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC34.24■■■■□ 3.07
Ube2uB1AUC4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC34.24■■■■□ 3.07
Ube2uB1AUC4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Ube2uB1AUC4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Ube2uB1AUC4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Ube2uB1AUC4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC34.22■■■■□ 3.07
Ube2uB1AUC4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
Ube2uB1AUC4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC34.21■■■■□ 3.07
Ube2uB1AUC4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Ube2uB1AUC4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Ube2uB1AUC4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Ube2uB1AUC4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Ube2uB1AUC4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Ube2uB1AUC4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC34.2■■■■□ 3.07
Ube2uB1AUC4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Ube2uB1AUC4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Ube2uB1AUC4 Fezf2-202ENSMUST00000224023 1917 ntBASIC34.2■■■■□ 3.06
Ube2uB1AUC4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC34.19■■■■□ 3.06
Ube2uB1AUC4 Cap2-205ENSMUST00000225824 1634 ntBASIC34.17■■■■□ 3.06
Ube2uB1AUC4 Gm12818-201ENSMUST00000117562 1349 ntBASIC34.16■■■■□ 3.06
Ube2uB1AUC4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Ube2uB1AUC4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Ube2uB1AUC4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
Ube2uB1AUC4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Ube2uB1AUC4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Ube2uB1AUC4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Ube2uB1AUC4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC34.13■■■■□ 3.05
Ube2uB1AUC4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Ube2uB1AUC4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Ube2uB1AUC4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Ube2uB1AUC4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC34.12■■■■□ 3.05
Ube2uB1AUC4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC34.12■■■■□ 3.05
Ube2uB1AUC4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
Ube2uB1AUC4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Ube2uB1AUC4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Ube2uB1AUC4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
Ube2uB1AUC4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
Ube2uB1AUC4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
Ube2uB1AUC4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms