Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Chd3B1AR17 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chd3B1AR17 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chd3B1AR17 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chd3B1AR17 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chd3B1AR17 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.07■■□□□ 1.28
Chd3B1AR17 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Chd3B1AR17 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chd3B1AR17 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chd3B1AR17 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.05■■□□□ 1.28
Chd3B1AR17 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Chd3B1AR17 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.04■■□□□ 1.28
Chd3B1AR17 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Chd3B1AR17 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chd3B1AR17 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chd3B1AR17 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chd3B1AR17 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chd3B1AR17 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Chd3B1AR17 Mir3960-201ENSMUST00000198213 73 ntBASIC23.01■■□□□ 1.27
Chd3B1AR17 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chd3B1AR17 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Chd3B1AR17 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chd3B1AR17 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23■■□□□ 1.27
Chd3B1AR17 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23■■□□□ 1.27
Chd3B1AR17 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23■■□□□ 1.27
Chd3B1AR17 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chd3B1AR17 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Chd3B1AR17 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chd3B1AR17 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chd3B1AR17 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chd3B1AR17 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.98■■□□□ 1.27
Chd3B1AR17 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.97■■□□□ 1.27
Chd3B1AR17 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.97■■□□□ 1.27
Chd3B1AR17 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.97■■□□□ 1.27
Chd3B1AR17 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chd3B1AR17 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Chd3B1AR17 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Chd3B1AR17 Gm4799-201ENSMUST00000095396 657 ntBASIC22.96■■□□□ 1.27
Chd3B1AR17 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.96■■□□□ 1.27
Chd3B1AR17 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.96■■□□□ 1.27
Chd3B1AR17 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chd3B1AR17 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chd3B1AR17 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Chd3B1AR17 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chd3B1AR17 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chd3B1AR17 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chd3B1AR17 Gm16437-201ENSMUST00000025669 507 ntBASIC22.94■■□□□ 1.26
Chd3B1AR17 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Chd3B1AR17 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Chd3B1AR17 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chd3B1AR17 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd3B1AR17 Cap2-205ENSMUST00000225824 1634 ntBASIC22.93■■□□□ 1.26
Chd3B1AR17 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Chd3B1AR17 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.93■■□□□ 1.26
Chd3B1AR17 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd3B1AR17 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd3B1AR17 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.93■■□□□ 1.26
Chd3B1AR17 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Chd3B1AR17 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chd3B1AR17 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chd3B1AR17 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.91■■□□□ 1.26
Chd3B1AR17 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Chd3B1AR17 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Chd3B1AR17 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Chd3B1AR17 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.91■■□□□ 1.26
Chd3B1AR17 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chd3B1AR17 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.91■■□□□ 1.26
Chd3B1AR17 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Chd3B1AR17 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.9■■□□□ 1.26
Chd3B1AR17 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chd3B1AR17 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Chd3B1AR17 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Chd3B1AR17 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Chd3B1AR17 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Chd3B1AR17 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chd3B1AR17 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chd3B1AR17 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.87■■□□□ 1.25
Chd3B1AR17 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Chd3B1AR17 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Chd3B1AR17 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chd3B1AR17 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Chd3B1AR17 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Chd3B1AR17 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chd3B1AR17 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Chd3B1AR17 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Chd3B1AR17 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chd3B1AR17 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Chd3B1AR17 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chd3B1AR17 Gm9806-201ENSMUST00000051080 552 ntBASIC22.85■■□□□ 1.25
Chd3B1AR17 Gm11687-201ENSMUST00000118911 886 ntBASIC22.84■■□□□ 1.25
Chd3B1AR17 Scarna2-201ENSMUST00000157560 414 ntBASIC22.84■■□□□ 1.25
Chd3B1AR17 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.83■■□□□ 1.25
Chd3B1AR17 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.83■■□□□ 1.25
Chd3B1AR17 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.83■■□□□ 1.24
Chd3B1AR17 Gm12366-201ENSMUST00000121722 873 ntBASIC22.83■■□□□ 1.24
Chd3B1AR17 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.83■■□□□ 1.24
Chd3B1AR17 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.83■■□□□ 1.24
Chd3B1AR17 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.83■■□□□ 1.24
Chd3B1AR17 Gm5786-201ENSMUST00000085368 882 ntBASIC22.83■■□□□ 1.24
Chd3B1AR17 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.83■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms