Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13-1A0A075B644 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13-1A0A075B644 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13-1A0A075B644 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13-1A0A075B644 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13-1A0A075B644 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13-1A0A075B644 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13-1A0A075B644 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13-1A0A075B644 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav13-1A0A075B644 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.38■□□□□ 0.21
Trav13-1A0A075B644 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav13-1A0A075B644 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-1A0A075B644 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-1A0A075B644 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav13-1A0A075B644 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-1A0A075B644 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-1A0A075B644 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13-1A0A075B644 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13-1A0A075B644 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13-1A0A075B644 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav13-1A0A075B644 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13-1A0A075B644 Gm6311-201ENSMUST00000073790 878 ntBASIC16.36■□□□□ 0.21
Trav13-1A0A075B644 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav13-1A0A075B644 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13-1A0A075B644 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13-1A0A075B644 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.35■□□□□ 0.21
Trav13-1A0A075B644 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trav13-1A0A075B644 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13-1A0A075B644 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav13-1A0A075B644 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13-1A0A075B644 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13-1A0A075B644 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13-1A0A075B644 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav13-1A0A075B644 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.34■□□□□ 0.21
Trav13-1A0A075B644 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13-1A0A075B644 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13-1A0A075B644 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13-1A0A075B644 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Trav13-1A0A075B644 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13-1A0A075B644 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav13-1A0A075B644 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav13-1A0A075B644 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-1A0A075B644 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-1A0A075B644 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-1A0A075B644 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-1A0A075B644 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-1A0A075B644 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13-1A0A075B644 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav13-1A0A075B644 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13-1A0A075B644 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Trav13-1A0A075B644 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13-1A0A075B644 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13-1A0A075B644 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav13-1A0A075B644 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13-1A0A075B644 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav13-1A0A075B644 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav13-1A0A075B644 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trav13-1A0A075B644 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav13-1A0A075B644 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13-1A0A075B644 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13-1A0A075B644 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13-1A0A075B644 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13-1A0A075B644 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13-1A0A075B644 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13-1A0A075B644 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.27■□□□□ 0.2
Trav13-1A0A075B644 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav13-1A0A075B644 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Trav13-1A0A075B644 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-1A0A075B644 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-1A0A075B644 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav13-1A0A075B644 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav13-1A0A075B644 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav13-1A0A075B644 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-1A0A075B644 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-1A0A075B644 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-1A0A075B644 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-1A0A075B644 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav13-1A0A075B644 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-1A0A075B644 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav13-1A0A075B644 Gm4799-201ENSMUST00000095396 657 ntBASIC16.25■□□□□ 0.19
Trav13-1A0A075B644 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-1A0A075B644 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-1A0A075B644 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13-1A0A075B644 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav13-1A0A075B644 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav13-1A0A075B644 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav13-1A0A075B644 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-1A0A075B644 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-1A0A075B644 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-1A0A075B644 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-1A0A075B644 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trav13-1A0A075B644 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-1A0A075B644 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-1A0A075B644 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trav13-1A0A075B644 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav13-1A0A075B644 Gm37136-201ENSMUST00000194368 194 ntBASIC16.22■□□□□ 0.19
Trav13-1A0A075B644 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13-1A0A075B644 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13-1A0A075B644 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13-1A0A075B644 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms