Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16,9■□□□□ 0,3
Trav13d-1A0A075B606 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16,9■□□□□ 0,3
Trav13d-1A0A075B606 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16,89■□□□□ 0,29
Trav13d-1A0A075B606 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16,89■□□□□ 0,29
Trav13d-1A0A075B606 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16,89■□□□□ 0,29
Trav13d-1A0A075B606 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16,89■□□□□ 0,29
Trav13d-1A0A075B606 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16,88■□□□□ 0,29
Trav13d-1A0A075B606 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16,88■□□□□ 0,29
Trav13d-1A0A075B606 Gm6311-201ENSMUST00000073790 878 ntBASIC16,88■□□□□ 0,29
Trav13d-1A0A075B606 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16,88■□□□□ 0,29
Trav13d-1A0A075B606 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16,87■□□□□ 0,29
Trav13d-1A0A075B606 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16,87■□□□□ 0,29
Trav13d-1A0A075B606 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16,86■□□□□ 0,29
Trav13d-1A0A075B606 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16,86■□□□□ 0,29
Trav13d-1A0A075B606 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16,86■□□□□ 0,29
Trav13d-1A0A075B606 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16,86■□□□□ 0,29
Trav13d-1A0A075B606 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16,86■□□□□ 0,29
Trav13d-1A0A075B606 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16,86■□□□□ 0,29
Trav13d-1A0A075B606 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16,86■□□□□ 0,29
Trav13d-1A0A075B606 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16,86■□□□□ 0,29
Trav13d-1A0A075B606 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16,86■□□□□ 0,29
Trav13d-1A0A075B606 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16,85■□□□□ 0,29
Trav13d-1A0A075B606 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16,85■□□□□ 0,29
Trav13d-1A0A075B606 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16,83■□□□□ 0,28
Trav13d-1A0A075B606 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16,83■□□□□ 0,28
Trav13d-1A0A075B606 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16,83■□□□□ 0,28
Trav13d-1A0A075B606 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16,83■□□□□ 0,28
Trav13d-1A0A075B606 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16,82■□□□□ 0,28
Trav13d-1A0A075B606 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16,82■□□□□ 0,28
Trav13d-1A0A075B606 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16,82■□□□□ 0,28
Trav13d-1A0A075B606 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16,82■□□□□ 0,28
Trav13d-1A0A075B606 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16,81■□□□□ 0,28
Trav13d-1A0A075B606 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16,81■□□□□ 0,28
Trav13d-1A0A075B606 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16,81■□□□□ 0,28
Trav13d-1A0A075B606 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16,81■□□□□ 0,28
Trav13d-1A0A075B606 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16,81■□□□□ 0,28
Trav13d-1A0A075B606 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16,81■□□□□ 0,28
Trav13d-1A0A075B606 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16,81■□□□□ 0,28
Trav13d-1A0A075B606 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16,8■□□□□ 0,28
Trav13d-1A0A075B606 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16,8■□□□□ 0,28
Trav13d-1A0A075B606 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16,8■□□□□ 0,28
Trav13d-1A0A075B606 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16,79■□□□□ 0,28
Trav13d-1A0A075B606 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16,79■□□□□ 0,28
Trav13d-1A0A075B606 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16,79■□□□□ 0,28
Trav13d-1A0A075B606 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16,79■□□□□ 0,28
Trav13d-1A0A075B606 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16,79■□□□□ 0,28
Trav13d-1A0A075B606 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16,78■□□□□ 0,28
Trav13d-1A0A075B606 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16,78■□□□□ 0,28
Trav13d-1A0A075B606 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16,78■□□□□ 0,28
Trav13d-1A0A075B606 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16,78■□□□□ 0,28
Trav13d-1A0A075B606 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16,78■□□□□ 0,28
Trav13d-1A0A075B606 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16,77■□□□□ 0,28
Trav13d-1A0A075B606 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16,77■□□□□ 0,28
Trav13d-1A0A075B606 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16,77■□□□□ 0,28
Trav13d-1A0A075B606 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16,77■□□□□ 0,28
Trav13d-1A0A075B606 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16,77■□□□□ 0,28
Trav13d-1A0A075B606 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16,77■□□□□ 0,27
Trav13d-1A0A075B606 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16,77■□□□□ 0,27
Trav13d-1A0A075B606 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16,76■□□□□ 0,27
Trav13d-1A0A075B606 Mir6538-201ENSMUST00000183713 110 ntBASIC16,76■□□□□ 0,27
Trav13d-1A0A075B606 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16,76■□□□□ 0,27
Trav13d-1A0A075B606 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16,76■□□□□ 0,27
Trav13d-1A0A075B606 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16,76■□□□□ 0,27
Trav13d-1A0A075B606 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16,76■□□□□ 0,27
Trav13d-1A0A075B606 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16,76■□□□□ 0,27
Trav13d-1A0A075B606 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16,75■□□□□ 0,27
Trav13d-1A0A075B606 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16,75■□□□□ 0,27
Trav13d-1A0A075B606 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16,75■□□□□ 0,27
Trav13d-1A0A075B606 Gm11175-201ENSMUST00000116172 543 ntBASIC16,75■□□□□ 0,27
Trav13d-1A0A075B606 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16,75■□□□□ 0,27
Trav13d-1A0A075B606 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16,75■□□□□ 0,27
Trav13d-1A0A075B606 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16,75■□□□□ 0,27
Trav13d-1A0A075B606 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16,74■□□□□ 0,27
Trav13d-1A0A075B606 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16,74■□□□□ 0,27
Trav13d-1A0A075B606 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16,74■□□□□ 0,27
Trav13d-1A0A075B606 Gm4799-201ENSMUST00000095396 657 ntBASIC16,74■□□□□ 0,27
Trav13d-1A0A075B606 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16,74■□□□□ 0,27
Trav13d-1A0A075B606 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16,74■□□□□ 0,27
Trav13d-1A0A075B606 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16,74■□□□□ 0,27
Trav13d-1A0A075B606 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16,73■□□□□ 0,27
Trav13d-1A0A075B606 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16,73■□□□□ 0,27
Trav13d-1A0A075B606 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16,73■□□□□ 0,27
Trav13d-1A0A075B606 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16,73■□□□□ 0,27
Trav13d-1A0A075B606 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16,72■□□□□ 0,27
Trav13d-1A0A075B606 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16,71■□□□□ 0,27
Trav13d-1A0A075B606 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16,71■□□□□ 0,27
Trav13d-1A0A075B606 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16,71■□□□□ 0,27
Trav13d-1A0A075B606 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16,71■□□□□ 0,27
Trav13d-1A0A075B606 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16,71■□□□□ 0,27
Trav13d-1A0A075B606 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16,71■□□□□ 0,27
Trav13d-1A0A075B606 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16,71■□□□□ 0,27
Trav13d-1A0A075B606 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16,71■□□□□ 0,27
Trav13d-1A0A075B606 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16,7■□□□□ 0,26
Trav13d-1A0A075B606 Gm37136-201ENSMUST00000194368 194 ntBASIC16,7■□□□□ 0,26
Trav13d-1A0A075B606 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16,7■□□□□ 0,26
Trav13d-1A0A075B606 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16,69■□□□□ 0,26
Trav13d-1A0A075B606 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16,69■□□□□ 0,26
Trav13d-1A0A075B606 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16,69■□□□□ 0,26
Trav13d-1A0A075B606 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16,69■□□□□ 0,26
Trav13d-1A0A075B606 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16,69■□□□□ 0,26
Retrieved 100 of 76,532 protein–RNA pairs in 12,5 ms