Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 AP001784.1-201ENST00000624107 428 ntBASIC4.86□□□□□ -1.63
CAPN6Q9Y6Q1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.86□□□□□ -1.63
CAPN6Q9Y6Q1 LINC01355-201ENST00000566551 5444 ntBASIC4.86□□□□□ -1.63
CAPN6Q9Y6Q1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN6Q9Y6Q1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CAPN6Q9Y6Q1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN6Q9Y6Q1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN6Q9Y6Q1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN6Q9Y6Q1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.86□□□□□ -1.63
CAPN6Q9Y6Q1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 SCN1A-220ENST00000641603 12506 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC005332.5-201ENST00000591222 2919 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 RNA5SP28-201ENST00000363841 119 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 Y_RNA.389-201ENST00000383924 113 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 Y_RNA.399-201ENST00000383955 105 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 Y_RNA.428-201ENST00000384078 102 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 Y_RNA.473-201ENST00000384333 102 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 RNU6-754P-201ENST00000391166 107 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AL603908.1-201ENST00000406098 201 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 RPL21P24-201ENST00000413752 448 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC080125.1-201ENST00000414888 684 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AL590632.1-201ENST00000424289 371 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 FAR2P4-202ENST00000425399 584 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AL360081.1-201ENST00000428299 555 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 RPL23AP69-201ENST00000431134 458 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 RNU7-167P-201ENST00000459160 62 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 RPS20P21-201ENST00000466859 343 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC012158.1-204ENST00000483430 465 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC008897.1-201ENST00000494006 347 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AL671862.1-201ENST00000515851 349 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 RNU6-1069P-201ENST00000516612 133 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 RNU6-1332P-201ENST00000516666 104 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 RN7SKP66-201ENST00000516681 231 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 SNORD116.3-201ENST00000517176 78 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC008694.2-201ENST00000517591 306 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC100870.1-201ENST00000522035 505 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC022882.1-201ENST00000532142 501 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 SETP7-201ENST00000552169 453 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC063949.1-201ENST00000552900 865 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 MTND6P33-201ENST00000571794 183 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC110743.1-201ENST00000584870 478 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC018889.1-201ENST00000605372 397 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AL589994.2-201ENST00000621124 579 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 BTBD10P1-201ENST00000549824 1352 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 AC009951.1-201ENST00000623674 2614 ntBASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CAPN6Q9Y6Q1 SAGE4P-201ENST00000442271 3381 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AC093775.1-201ENST00000624154 1868 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 RNU1-108P-201ENST00000362556 161 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 RNU1-115P-201ENST00000365329 160 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 RNU6-946P-201ENST00000383878 107 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 RNU1-44P-201ENST00000384453 163 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 SNORA16.2-201ENST00000390991 127 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 Y_RNA.645-201ENST00000391229 102 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 RPS15AP40-201ENST00000419621 391 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 EIF4EP1-201ENST00000422311 642 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AL591212.2-201ENST00000433923 257 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 H2AFZP5-201ENST00000446960 382 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AC005532.2-201ENST00000467154 373 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AC103987.1-201ENST00000473394 348 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AC004453.1-201ENST00000487895 408 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AC104564.1-201ENST00000493028 407 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 RNU6-388P-201ENST00000517012 105 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 RNU6-389P-201ENST00000517048 105 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 Y_RNA.721-201ENST00000517207 102 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 MIR4489-201ENST00000578869 62 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AL391358.1-201ENST00000605342 190 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AL121612.2-201ENST00000612261 482 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 EIF3FP1-201ENST00000613970 806 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 SNHG22-203ENST00000617833 660 ntBASIC4.84□□□□□ -1.63
CAPN6Q9Y6Q1 AC091905.2-201ENST00000623143 306 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms