Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 MIR422A-201ENST00000362286 90 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 SNORA7.2-201ENST00000364446 145 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 SNORD51-201ENST00000384320 80 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 RNU6-821P-201ENST00000390995 107 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC109780.2-201ENST00000413467 845 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 BTF3L4P1-201ENST00000413813 468 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 HMGB3P23-201ENST00000414981 585 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 SDCBPP3-201ENST00000419629 891 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 RPS27AP14-201ENST00000422868 454 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 BX890604.2-201ENST00000427883 474 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC010153.1-201ENST00000432862 727 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 GDI2P2-201ENST00000445131 608 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 BMI1P1-201ENST00000445879 941 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AL353691.1-201ENST00000451332 387 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 OR6K1P-201ENST00000456766 971 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 MTND4LP3-201ENST00000468320 276 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 RPS3AP14-201ENST00000483907 780 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC108860.1-201ENST00000484521 383 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 RN7SL283P-201ENST00000489055 303 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC006445.1-201ENST00000491925 405 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC106872.3-201ENST00000495104 446 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC022447.3-201ENST00000506865 495 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 RNA5SP341-201ENST00000516261 117 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC107934.2-201ENST00000518653 310 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 OR4P1P-201ENST00000530808 1136 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC135279.1-201ENST00000543493 504 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 EEF1B2P4-201ENST00000551398 348 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 MIR4307-201ENST00000582802 84 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC239868.4-201ENST00000608318 671 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC068137.4-201ENST00000638485 296 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC006378.2-201ENST00000623178 2476 ntBASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.19□□□□□ -1.9
CSNK1G3Q9Y6M4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 Y_RNA.234-201ENST00000364409 97 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 U8.14-201ENST00000390843 143 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AL138885.1-201ENST00000405921 675 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 MIR1305-201ENST00000408300 86 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC092447.6-201ENST00000414578 210 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 COX6CP12-201ENST00000446748 202 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 HMGB1P15-201ENST00000453854 435 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 RPS4XP2-201ENST00000458402 793 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 RN7SL863P-201ENST00000462370 296 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC104563.1-201ENST00000476147 376 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC010625.1-201ENST00000511296 403 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC091965.2-201ENST00000512324 613 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 Y_RNA.695-201ENST00000516715 107 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 MIR548AB-201ENST00000584917 84 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC119751.7-201ENST00000600494 245 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC012065.4-201ENST00000602445 679 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 uc_338.1-201ENST00000612113 180 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 AC018692.3-201ENST00000623929 123 ntBASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1G3Q9Y6M4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms