Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC243773.3-201ENST00000613270 256 ntBASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
RHBDD3Q9Y3P4 ANKRD36P1-201ENST00000344424 659 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 RNA5SP393-201ENST00000363423 117 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 ANAPC10P1-201ENST00000395991 556 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 UBA52P6-201ENST00000399822 382 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AL139132.1-201ENST00000431587 344 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 RPL36AP6-201ENST00000435770 321 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 Z80107.1-201ENST00000436830 412 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 OR10R1P-201ENST00000441524 1141 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 ARPC3P5-201ENST00000448802 534 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC079776.3-201ENST00000450665 370 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 SNORD121B-201ENST00000458838 81 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 snoU13.8-201ENST00000458890 104 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 RPS20P20-201ENST00000460498 340 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 S100A11P2-201ENST00000467589 312 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 RPS20P22-201ENST00000473700 357 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 NAMPTP2-201ENST00000505629 1115 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 SNORA70.24-201ENST00000517233 118 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC087808.1-201ENST00000520501 361 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 ELOCP31-201ENST00000540463 467 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AL356280.1-201ENST00000603614 379 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC069304.2-201ENST00000605154 435 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC069545.1-201ENST00000605671 358 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AL390208.1-201ENST00000605885 644 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC103710.4-201ENST00000609301 899 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC008498.1-201ENST00000613012 531 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AL512506.1-201ENST00000613918 449 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AL357080.1-201ENST00000617394 239 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC079228.1-201ENST00000624774 1049 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC109315.1-201ENST00000584143 1347 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 AC010329.5-201ENST00000623497 2174 ntBASIC2.39□□□□□ -2.03
RHBDD3Q9Y3P4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 MIR26A1-201ENST00000362205 77 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 RNU5B-4P-201ENST00000363508 111 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 RNA5SP387-201ENST00000364226 106 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 RNU6-359P-201ENST00000365466 108 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 SNORA18.3-201ENST00000384122 132 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AL031679.1-201ENST00000400616 525 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC007064.1-201ENST00000412238 351 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 BTF3P8-201ENST00000414577 526 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC080125.1-201ENST00000414888 684 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 ZNF863P-201ENST00000426746 417 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 GTF2IP7-202ENST00000436677 309 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 ARF4P4-201ENST00000439608 520 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 CYCSP32-201ENST00000440548 321 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 MTCYBP42-201ENST00000444653 1130 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC104389.3-201ENST00000445629 235 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 DDX3P2-201ENST00000446138 111 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 COX6CP12-201ENST00000446748 202 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC008571.1-201ENST00000467232 300 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC107626.1-201ENST00000471084 183 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC090525.1-201ENST00000479116 478 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 SUMO2P6-201ENST00000505273 288 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 MTCYBP16-201ENST00000509187 1129 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 SNORA74D-201ENST00000516404 141 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 RNU6-826P-201ENST00000516827 104 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC093536.2-201ENST00000565257 1406 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 MIR5708-201ENST00000579723 85 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 MTATP6P2-201ENST00000603319 678 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 SNHG22-203ENST00000617833 660 ntBASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
RHBDD3Q9Y3P4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 SNORA25.6-201ENST00000364121 118 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 SNORA70.4-201ENST00000365509 134 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 SNORA44-201ENST00000384584 132 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms