Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS9D1Q9Y2B5 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-103P-201ENST00000363686 107 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 RN7SKP187-201ENST00000365536 330 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 MIR32-201ENST00000384965 70 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 PPP1R11P2-201ENST00000423543 382 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 RPL12P16-201ENST00000431098 498 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 AC005532.2-201ENST00000467154 373 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 AC104164.2-201ENST00000496953 495 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 APOOP4-201ENST00000513530 597 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 RN7SKP164-201ENST00000516138 266 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 AC006115.2-201ENST00000596823 202 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 AC022441.3-201ENST00000605737 136 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 AC010632.3-201ENST00000611377 369 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 AC005296.1-201ENST00000616145 209 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 AL354798.1-201ENST00000622505 329 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 AC090617.7-201ENST00000623952 126 ntBASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS9D1Q9Y2B5 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 RNA5SP232-201ENST00000364144 119 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 RNA5SP211-201ENST00000365516 117 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 RNU6-339P-201ENST00000384310 107 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 MIR135A2-201ENST00000384854 100 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 MIR153-2-201ENST00000385225 87 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 SNORA12.1-201ENST00000390873 148 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 SNORA26.2-201ENST00000390922 122 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AL160275.2-201ENST00000412010 394 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC245096.1-201ENST00000413104 546 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC092447.6-201ENST00000414578 210 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC108479.1-201ENST00000431142 427 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC090774.1-201ENST00000435925 246 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 RN7SL799P-201ENST00000475891 298 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 RPS29P24-201ENST00000486345 171 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 PPIAP19-201ENST00000486414 492 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 FTH1P24-201ENST00000503502 462 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 RNA5SP441-201ENST00000516809 88 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AL391261.3-201ENST00000557194 520 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC002310.3-201ENST00000569728 723 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 LARP7P3-201ENST00000579888 337 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AL355812.1-201ENST00000603215 216 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC239868.2-201ENST00000564237 4527 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC097461.1-201ENST00000568928 2821 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AC083837.1-201ENST00000565297 2994 ntBASIC5.97□□□□□ -1.45
VPS9D1Q9Y2B5 AP001284.1-201ENST00000528393 2118 ntBASIC5.96□□□□□ -1.45
VPS9D1Q9Y2B5 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS9D1Q9Y2B5 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 MIR412-201ENST00000362142 91 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 RNA5SP52-201ENST00000362448 134 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 MIR621-201ENST00000384919 96 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 AL035422.1-201ENST00000414193 397 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 RPL12P18-201ENST00000437175 325 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 RPL5P7-201ENST00000444235 813 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 AC090804.1-201ENST00000448870 490 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 AC092991.1-201ENST00000477176 376 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 RPL36AP41-201ENST00000493820 306 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 RN7SKP288-201ENST00000516227 268 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 RNA5SP165-201ENST00000517142 115 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 AC008489.1-201ENST00000524271 483 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 AP000620.1-201ENST00000527147 504 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 AC100767.1-201ENST00000528178 123 ntBASIC5.96□□□□□ -1.46
VPS9D1Q9Y2B5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms