Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AF228730.2-201ENST00000438784 848 ntBASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 TPT1P7-201ENST00000458300 517 ntBASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 AC023598.1-201ENST00000472521 361 ntBASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 COX7A2P2-201ENST00000505291 250 ntBASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 RNU6-1095P-201ENST00000516148 108 ntBASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 RNU6-714P-201ENST00000516963 103 ntBASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 AC015871.2-201ENST00000603605 948 ntBASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 AC103710.1-201ENST00000610003 901 ntBASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 RNU6-97P-201ENST00000363387 104 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 Y_RNA.234-201ENST00000364409 97 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 RNU6-1215P-201ENST00000384441 102 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 RNU2-66P-201ENST00000410650 161 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 BX890604.2-201ENST00000427883 474 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 EZH2P1-201ENST00000431167 291 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 MTCYBP45-201ENST00000435243 565 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 AC244505.5-201ENST00000443639 207 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 AP1S2P1-201ENST00000457344 379 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 SNORA59A-201ENST00000459326 152 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 AC011825.1-201ENST00000484967 388 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 MLLT10P2-201ENST00000506434 249 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 MIR3682-201ENST00000581338 84 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 AC004492.1-201ENST00000607036 742 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 MIR7112-201ENST00000616126 65 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 U4.6-201ENST00000621618 127 ntBASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK11AQ9UQ88 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 RNU6-359P-201ENST00000365466 108 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 RNU6-1207P-201ENST00000384343 107 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 RPS3AP3-201ENST00000411933 242 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AC007390.1-201ENST00000415722 356 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AL137014.1-201ENST00000420490 1226 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 NDUFB1P1-201ENST00000435191 180 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 KLF3P2-201ENST00000465138 268 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 NDUFB4P2-201ENST00000509515 391 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AC105914.1-201ENST00000511798 226 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 SETP2-201ENST00000553886 926 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AC010546.1-201ENST00000569391 485 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AC009977.1-201ENST00000586015 570 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AC008498.1-201ENST00000613012 531 ntBASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK11AQ9UQ88 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 AL079305.1-201ENST00000623159 3008 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 MFSD8-233ENST00000641482 4860 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 FRG1BP-201ENST00000278882 761 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 Y_RNA.3-201ENST00000362331 103 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 RNU5A-6P-201ENST00000384136 116 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 RNU4-65P-201ENST00000410473 140 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 RNU6-248P-201ENST00000410720 107 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 HMGB3P23-201ENST00000414981 585 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 AC010975.2-201ENST00000427781 588 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 NEK4P1-201ENST00000433383 879 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 AC091862.1-201ENST00000438016 1100 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 AC073614.1-201ENST00000438690 650 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 AC108734.1-201ENST00000439549 399 ntBASIC5.48□□□□□ -1.53
CDK11AQ9UQ88 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms