Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AL136097.1-201ENST00000456945 913 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 RPS20P24-201ENST00000457473 361 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 RN7SL542P-201ENST00000467147 294 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 RPL9P6-201ENST00000492764 598 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC105252.1-201ENST00000503089 286 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 RNU6-27P-201ENST00000516146 107 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 RNU6-506P-201ENST00000516553 94 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 RN7SKP289-201ENST00000517244 295 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC123904.2-201ENST00000548059 300 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC006130.2-201ENST00000586202 326 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC007684.1-201ENST00000609671 477 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC109347.2-201ENST00000610220 349 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC068944.2-201ENST00000610373 403 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AL596245.1-201ENST00000618994 362 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AL161637.1-201ENST00000622380 412 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC091925.2-201ENST00000625059 256 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 MIR4496-201ENST00000635896 61 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 OR5H6-203ENST00000642105 978 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC092447.10-201ENST00000620607 1652 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AL353746.1-201ENST00000566293 6881 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 RNU6-989P-201ENST00000362756 107 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 Y_RNA.493-201ENST00000384422 102 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 MT-TC-201ENST00000387405 66 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AL359704.1-201ENST00000411586 781 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 USP9YP36-201ENST00000424581 829 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 ISCA1P6-201ENST00000427740 390 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 ARF4P2-201ENST00000430209 526 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC008264.1-201ENST00000447612 367 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC125238.1-201ENST00000448842 249 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 snoU13.8-201ENST00000458890 104 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC023598.1-201ENST00000472521 361 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AL049830.2-201ENST00000480072 201 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 RN7SKP18-201ENST00000516005 275 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 RNU1-95P-201ENST00000516357 160 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 RNU1-128P-201ENST00000516704 160 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC022616.6-201ENST00000520479 119 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC136619.2-201ENST00000563361 631 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC090615.1-201ENST00000577519 154 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 CKS1BP3-201ENST00000600888 237 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC010591.1-201ENST00000603941 649 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AL359999.1-201ENST00000604513 294 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AL109618.2-201ENST00000605527 211 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AL391813.2-201ENST00000609113 322 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 OR10AB1P-201ENST00000609613 938 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC103710.1-201ENST00000610003 901 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC091304.9-201ENST00000612091 226 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 U6atac.1-201ENST00000616025 117 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 CR392039.5-201ENST00000623201 510 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC110801.1-201ENST00000623590 212 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC040168.1-201ENST00000623594 991 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC068880.5-201ENST00000624331 290 ntBASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.55□□□□□ -1.84
SMARCAL1Q9NZC9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 MIR148B-201ENST00000362252 99 ntBASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 RNA5SP258-201ENST00000362750 119 ntBASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 RNU6-263P-201ENST00000363811 107 ntBASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 RAB9AP3-201ENST00000412737 573 ntBASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 AC005517.2-201ENST00000424673 553 ntBASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 AL358934.1-201ENST00000432346 324 ntBASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.54□□□□□ -1.84
SMARCAL1Q9NZC9 RAB9AP1-201ENST00000449393 573 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms