Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 RPL7P26-201ENST00000333817 754 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 SNORD115-7-201ENST00000365306 82 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 RNU6-1029P-201ENST00000384109 107 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 PTMAP5-201ENST00000393073 333 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AL645927.1-201ENST00000396783 406 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AL354719.1-201ENST00000406535 843 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 RNU6-1068P-201ENST00000410958 103 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC022028.1-201ENST00000412054 408 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 OR9R1P-201ENST00000412200 877 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 SNRPFP1-201ENST00000414761 252 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AL451054.2-201ENST00000420896 202 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AL162395.1-201ENST00000457882 422 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 RN7SL808P-201ENST00000496066 299 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC092436.1-201ENST00000506450 503 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AL359273.1-201ENST00000510918 627 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 RNU2-58P-201ENST00000516403 183 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 RNA5SP503-201ENST00000517047 117 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AP001781.1-201ENST00000530977 207 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 OR5D17P-201ENST00000531492 978 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC174048.1-201ENST00000603389 144 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC104763.2-201ENST00000604179 382 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC007619.2-201ENST00000605743 379 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AL355073.2-201ENST00000612106 557 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AL365204.3-201ENST00000612448 685 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC130324.3-201ENST00000614165 542 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 AC024614.3-201ENST00000637860 256 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 LINC02471-203ENST00000641941 4752 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 OR4G2P-202ENST00000641004 1759 ntBASIC4.25□□□□□ -1.73
MKS1Q9NXB0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MKS1Q9NXB0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AL139276.1-201ENST00000311910 1001 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 SNORA70F-201ENST00000384142 135 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 RNU6-14P-201ENST00000384630 106 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 RPL30P16-201ENST00000419341 429 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AL109913.1-201ENST00000421173 514 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AC011742.1-201ENST00000431448 434 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AL162591.2-201ENST00000449634 317 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 RN7SL329P-201ENST00000467740 299 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 SNORA31.3-201ENST00000516029 96 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 IGKV2-23-201ENST00000518729 323 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AP005435.4-201ENST00000529514 284 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AP000676.2-201ENST00000529711 301 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AP005205.1-201ENST00000563503 508 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AL360157.1-201ENST00000565962 87 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AC022968.1-201ENST00000567372 442 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 MIR4703-201ENST00000577728 79 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AC060780.3-201ENST00000589464 80 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AP002826.1-201ENST00000608835 315 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 RMST_3.1-201ENST00000611651 109 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 uc_338.11-201ENST00000619132 160 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AC116096.1-201ENST00000566804 2314 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 AP001148.1-201ENST00000624124 2359 ntBASIC4.24□□□□□ -1.73
MKS1Q9NXB0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MKS1Q9NXB0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms