Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 MTCO3P15-201ENST00000526563 574 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 UBTFL10-201ENST00000528532 562 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC087894.1-201ENST00000538359 518 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC023825.1-201ENST00000566704 1030 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC106782.4-201ENST00000568264 210 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 MIR5708-201ENST00000579723 85 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 MIR4513-201ENST00000581077 86 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC015688.2-201ENST00000584523 262 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AL645944.1-201ENST00000603857 493 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC120053.1-201ENST00000607706 736 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 TUG1_1.1-201ENST00000610654 145 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 DUXAP10-204ENST00000612052 616 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC018926.1-201ENST00000616335 435 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 UCA1.1-201ENST00000620952 75 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 RNU6-1197P-201ENST00000391183 107 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 RPS4XP7-201ENST00000406274 780 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 MTCO1P3-201ENST00000429327 192 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC129850.1-201ENST00000436203 508 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 THAP5P1-201ENST00000439089 262 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC092427.1-201ENST00000439177 601 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 OFD1P3Y-201ENST00000453312 783 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AL049714.1-201ENST00000466686 347 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC093801.2-201ENST00000503966 1050 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AL359273.1-201ENST00000510918 627 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC008837.1-201ENST00000511513 412 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 RNA5SP148-201ENST00000516527 94 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 RNU6-1261P-201ENST00000517194 104 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 OR4R2P-201ENST00000530815 597 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 HMGB1P14-201ENST00000557424 591 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC004009.2-201ENST00000623016 728 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AL157770.1-201ENST00000623049 439 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC010872.1-201ENST00000624225 675 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.41□□□□□ -2.02
TREX1Q9NSU2 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 AC010680.1-201ENST00000590024 3590 ntBASIC2.41□□□□□ -2.02
TREX1Q9NSU2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TREX1Q9NSU2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 RNU6-707P-201ENST00000364647 95 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 SNORA67.1-201ENST00000364749 141 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 SNORD65.1-201ENST00000390889 71 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 SNORA11.2-201ENST00000408318 127 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 MIR1290-201ENST00000408735 78 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 RNU2-43P-201ENST00000410306 190 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC104389.3-201ENST00000445629 235 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 RPL39P6-201ENST00000448289 150 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC026414.1-201ENST00000504046 698 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC147055.4-201ENST00000504399 745 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC098799.1-201ENST00000504752 800 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC113155.1-201ENST00000511141 769 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC090616.3-201ENST00000582184 217 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC099785.1-201ENST00000605697 437 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC103810.6-201ENST00000606708 136 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AP000254.1-201ENST00000609934 520 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC109454.4-201ENST00000623411 649 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AP003485.2-201ENST00000623636 610 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 AC009812.4-201ENST00000569134 1805 ntBASIC2.4□□□□□ -2.03
TREX1Q9NSU2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TREX1Q9NSU2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 Z82195.2-201ENST00000612348 18351 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 DEFB108F-201ENST00000344638 222 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 SNORA5B-201ENST00000363786 132 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 MIR767-201ENST00000390228 109 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms