Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SALL1Q9NSC2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 MT-TC-201ENST00000387405 66 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AL024474.1-201ENST00000404655 591 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 CETN4P-201ENST00000432407 469 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 RPL7P34-201ENST00000433316 712 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 MTND2P19-201ENST00000449129 1012 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 RPS24P6-201ENST00000452670 400 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 PABPC1P3-201ENST00000469174 459 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 RN7SL297P-201ENST00000483161 293 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AC114781.4-201ENST00000513707 639 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AC096725.1-201ENST00000514266 313 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 IGHV3-76-201ENST00000522465 295 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AC008127.2-201ENST00000549925 1075 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AL512347.1-201ENST00000566420 503 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 MIR4637-201ENST00000582405 84 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 MIR4999-201ENST00000585029 91 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 CLIC4P2-201ENST00000601934 717 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AL031281.1-201ENST00000604049 488 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AC112220.3-201ENST00000605502 502 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 CR381653.2-201ENST00000624041 768 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AC019226.2-201ENST00000625973 424 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AC243829.7-201ENST00000633081 225 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 AC097655.1-201ENST00000635075 318 ntBASIC3.24□□□□□ -1.89
SALL1Q9NSC2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SALL1Q9NSC2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 RNU6-931P-201ENST00000363850 107 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 RNU6-730P-201ENST00000383954 104 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 SNRPEP2-201ENST00000397592 279 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AL139039.1-201ENST00000401900 692 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 MIR1284-201ENST00000408337 120 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AL390023.1-201ENST00000428836 262 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 RPS6P15-201ENST00000431996 751 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 MTND4P6-201ENST00000438297 472 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 RPL9P33-201ENST00000484311 566 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 MTCYBP17-201ENST00000503579 789 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC114981.1-201ENST00000503897 678 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 SNORA9.3-201ENST00000516383 129 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 OR4T1P-201ENST00000554933 911 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC145350.1-201ENST00000567426 208 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC002400.1-201ENST00000569310 726 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 BNIP3P24-201ENST00000593398 557 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC006270.3-201ENST00000605967 1036 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC245297.2-201ENST00000610119 565 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC243773.3-201ENST00000613270 256 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC120349.3-201ENST00000624377 529 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 AC004925.1-201ENST00000624256 2706 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 GDI2P1-201ENST00000429312 1336 ntBASIC3.23□□□□□ -1.89
SALL1Q9NSC2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SALL1Q9NSC2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SALL1Q9NSC2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SALL1Q9NSC2 RNU6-50P-201ENST00000362356 103 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 RNA5SP68-201ENST00000363885 119 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 SNORA67.4-201ENST00000384688 142 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 AC016769.3-201ENST00000396562 315 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.22□□□□□ -1.89
SALL1Q9NSC2 AC093151.1-201ENST00000427711 313 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 RPS25P9-201ENST00000435591 252 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 RPL23AP74-201ENST00000437246 471 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 AL606662.1-201ENST00000445763 553 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 FDX1P2-201ENST00000450769 375 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 AL109741.2-201ENST00000455561 343 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.22□□□□□ -1.89
SALL1Q9NSC2 AC103975.1-201ENST00000482506 483 ntBASIC3.22□□□□□ -1.89
SALL1Q9NSC2 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.22□□□□□ -1.89
SALL1Q9NSC2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.22□□□□□ -1.89
SALL1Q9NSC2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.22□□□□□ -1.89
SALL1Q9NSC2 RNY4P37-201ENST00000516225 96 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms