Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 Y_RNA.126-201ENST00000363382 111 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 RNU6-511P-201ENST00000363496 107 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 RNY1P12-201ENST00000364251 105 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 RNU6-283P-201ENST00000364788 107 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 Y_RNA.296-201ENST00000364930 108 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 RNU1-64P-201ENST00000365443 163 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 AC110754.1-201ENST00000399740 601 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 GSTA9P-201ENST00000406231 611 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 MTND1P1-201ENST00000445453 368 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 RPS29P31-201ENST00000446147 164 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 VN1R17P-201ENST00000472048 1090 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 AC108078.1-201ENST00000508073 725 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 AC026402.1-201ENST00000513642 170 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 AC011979.2-201ENST00000527568 352 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 OR4H12P-201ENST00000556269 907 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 KLKP1-201ENST00000595979 403 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 AL606834.2-201ENST00000602954 668 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 SNHG22-203ENST00000617833 660 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 LRRC77P-213ENST00000637727 880 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HINT3Q9NQE9 AC073073.2-201ENST00000609827 2578 ntBASIC3.39□□□□□ -1.87
HINT3Q9NQE9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RNU6-181P-201ENST00000363225 107 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RN7SKP280-201ENST00000364196 304 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RNA5SP97-201ENST00000365006 84 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RNU6-169P-201ENST00000365336 107 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RNU6-282P-201ENST00000365357 103 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RNU1-39P-201ENST00000383897 165 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 SNORA36C-201ENST00000384289 132 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 Y_RNA.516-201ENST00000384541 124 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AL445189.1-201ENST00000405722 338 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 TXNP7-201ENST00000406296 293 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 Y_RNA.619-201ENST00000410951 90 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RNU2-71P-201ENST00000411395 189 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AL662791.1-201ENST00000441992 928 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC140076.1-201ENST00000449897 361 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC010631.1-201ENST00000474150 156 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 HSPE1P6-201ENST00000479457 291 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RPL9P33-201ENST00000484311 566 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RPL9P6-201ENST00000492764 598 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 MTND4LP31-201ENST00000514859 294 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RNU6-445P-201ENST00000516949 107 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 FAM60DP-201ENST00000524174 632 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC128657.1-201ENST00000549459 145 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 ARL2BPP2-201ENST00000550907 489 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC006960.3-201ENST00000561845 705 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AL845331.3-202ENST00000562856 261 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC106785.1-201ENST00000565935 262 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC105224.1-201ENST00000587055 421 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC093227.2-201ENST00000589357 285 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AL022154.1-201ENST00000604698 785 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AL049634.3-201ENST00000604968 457 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AL136363.1-201ENST00000605349 337 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 SNORA62.6-201ENST00000606322 83 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.38□□□□□ -1.87
HINT3Q9NQE9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HINT3Q9NQE9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms