Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RPL35AP22-201ENST00000436855 335 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC008264.1-201ENST00000447612 367 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 RN7SL601P-201ENST00000471221 293 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 RPL30P6-201ENST00000475925 342 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC135721.1-201ENST00000497954 479 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 RPF2P2-201ENST00000504693 896 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 FCF1P8-201ENST00000510322 597 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AF131216.2-201ENST00000512316 564 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AP000907.2-201ENST00000530827 353 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC037471.2-201ENST00000564941 598 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AP000254.1-201ENST00000609934 520 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC096577.2-201ENST00000611455 153 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AL603755.1-201ENST00000619504 163 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC127502.3-201ENST00000636170 1206 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AL445523.1-201ENST00000451184 1362 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC017071.1-201ENST00000564407 2204 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 SNORA23-201ENST00000365128 182 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 RNU6-754P-201ENST00000391166 107 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 SAR1AP2-201ENST00000392696 594 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 MTCYBP36-201ENST00000404146 440 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 Z99755.1-201ENST00000414048 380 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC018630.2-202ENST00000422992 927 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC005326.1-201ENST00000429197 123 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 MTATP6P17-201ENST00000431030 672 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AL365184.2-201ENST00000431139 435 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 LARP1BP3-201ENST00000437229 869 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AL512286.1-201ENST00000439244 400 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 MTND1P26-201ENST00000440488 538 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 RPL21P10-201ENST00000463521 490 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 RPS15AP36-201ENST00000492022 382 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC111000.2-201ENST00000507775 550 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 MTND1P22-201ENST00000510572 951 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 MTND4LP18-201ENST00000526864 291 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC011611.1-201ENST00000552179 197 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 TRAV37-201ENST00000553906 342 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC090888.1-201ENST00000561335 1141 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AL031985.2-201ENST00000600955 480 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC068790.3-201ENST00000602988 553 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AL133393.1-201ENST00000603277 287 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC007494.3-201ENST00000624660 743 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC019226.2-201ENST00000625973 424 ntBASIC3.09□□□□□ -1.91
UBQLN3Q9H347 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.09□□□□□ -1.91
UBQLN3Q9H347 MTND5P1-201ENST00000445440 1375 ntBASIC3.09□□□□□ -1.92
UBQLN3Q9H347 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 Y_RNA.97-201ENST00000363094 102 ntBASIC3.08□□□□□ -1.92
UBQLN3Q9H347 SNORA14A-201ENST00000364773 135 ntBASIC3.08□□□□□ -1.92
UBQLN3Q9H347 RNU1-39P-201ENST00000383897 165 ntBASIC3.08□□□□□ -1.92
UBQLN3Q9H347 RNU5A-2P-201ENST00000384337 116 ntBASIC3.08□□□□□ -1.92
UBQLN3Q9H347 RNU6-809P-201ENST00000384461 107 ntBASIC3.08□□□□□ -1.92
UBQLN3Q9H347 RNA5SP293-201ENST00000410527 113 ntBASIC3.08□□□□□ -1.92
UBQLN3Q9H347 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 MTND2P18-201ENST00000419962 1030 ntBASIC3.08□□□□□ -1.92
UBQLN3Q9H347 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 AC005300.1-201ENST00000428401 373 ntBASIC3.08□□□□□ -1.92
UBQLN3Q9H347 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 FTH1P1-201ENST00000437933 532 ntBASIC3.08□□□□□ -1.92
UBQLN3Q9H347 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.08□□□□□ -1.92
UBQLN3Q9H347 AC104472.2-201ENST00000469035 601 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms