Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS11Q9H270 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
VPS11Q9H270 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VPS11Q9H270 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.46□□□□□ -1.69
VPS11Q9H270 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VPS11Q9H270 AC125257.1-201ENST00000560400 2930 ntBASIC4.46□□□□□ -1.69
VPS11Q9H270 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
VPS11Q9H270 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.46□□□□□ -1.69
VPS11Q9H270 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS11Q9H270 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS11Q9H270 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS11Q9H270 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS11Q9H270 AC021146.4-201ENST00000309229 279 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS11Q9H270 Y_RNA.47-201ENST00000362697 108 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 Y_RNA.339-201ENST00000365325 102 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AL645733.1-201ENST00000402250 217 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AL356421.1-201ENST00000403255 413 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 RNU6-985P-201ENST00000410182 104 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 RNA5SP239-201ENST00000410218 129 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 RNU6-712P-201ENST00000410558 100 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 EI24P1-201ENST00000416584 867 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS11Q9H270 AC019097.1-201ENST00000424783 735 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS11Q9H270 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS11Q9H270 RPL23AP93-201ENST00000440847 484 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AL049734.2-201ENST00000441066 616 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS11Q9H270 AC012671.1-201ENST00000451912 203 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 RPS24P6-201ENST00000452670 400 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 MTCO3P10-201ENST00000455912 772 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AC007686.1-201ENST00000488511 463 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 IGLV2-34-201ENST00000490007 283 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AC078817.1-201ENST00000492623 435 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AC034222.1-201ENST00000494052 532 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AC107222.1-201ENST00000510899 637 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 NPM1P41-201ENST00000512920 831 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS11Q9H270 NARSP2-201ENST00000518524 679 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AC090281.1-201ENST00000523019 276 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.46□□□□□ -1.7
VPS11Q9H270 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS11Q9H270 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.46□□□□□ -1.7
VPS11Q9H270 AP000889.2-201ENST00000532684 490 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 APOOP3-201ENST00000536787 586 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS11Q9H270 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS11Q9H270 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.46□□□□□ -1.7
VPS11Q9H270 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS11Q9H270 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS11Q9H270 SNRPGP15-201ENST00000600149 222 ntBASIC4.46□□□□□ -1.7
VPS11Q9H270 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS11Q9H270 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS11Q9H270 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS11Q9H270 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS11Q9H270 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS11Q9H270 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS11Q9H270 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS11Q9H270 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS11Q9H270 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS11Q9H270 Y_RNA.301-201ENST00000364990 103 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 RNU6-169P-201ENST00000365336 107 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS11Q9H270 Y_RNA.476-201ENST00000384347 108 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 RN7SKP177-201ENST00000410567 355 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 RNU6-847P-201ENST00000411115 108 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 RN7SKP100-201ENST00000411258 284 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 HMGB3P2-201ENST00000411913 584 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 RPS12P24-201ENST00000412619 387 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 RPS23P10-201ENST00000416185 486 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 CHIAP3-201ENST00000423668 1133 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS11Q9H270 PTMAP6-201ENST00000439110 327 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS11Q9H270 AL136380.1-201ENST00000447970 162 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS11Q9H270 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS11Q9H270 U8.20-201ENST00000459445 131 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 AP000873.1-201ENST00000463987 400 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 Y_RNA.665-201ENST00000516177 98 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 RNU6-201P-201ENST00000517100 61 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 RNU6-988P-201ENST00000519081 107 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS11Q9H270 AC023442.1-201ENST00000531247 422 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 AC123904.2-201ENST00000548059 300 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS11Q9H270 HMGB1P6-201ENST00000569046 646 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS11Q9H270 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
VPS11Q9H270 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS11Q9H270 AC073539.2-201ENST00000597113 165 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 Z84480.1-201ENST00000605131 311 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 MIR432-201ENST00000606207 94 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.45□□□□□ -1.7
VPS11Q9H270 AL391813.2-201ENST00000609113 322 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 AC090510.2-201ENST00000617465 629 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 RMST_9.1-201ENST00000619945 193 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 MIR4727-201ENST00000622232 55 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms