Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC005921.1-201ENST00000510589 286 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 AC091133.4-201ENST00000511142 308 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 RNU6-314P-201ENST00000516574 104 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 IGKV2-26-201ENST00000518305 343 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.77□□□□□ -1.81
CDT1Q9H211 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC009101.1-201ENST00000568135 242 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC007687.1-201ENST00000602704 304 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 SRGNP1-201ENST00000603392 451 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 AP001596.2-201ENST00000608410 312 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 AC131902.3-201ENST00000611767 581 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.77□□□□□ -1.81
CDT1Q9H211 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CDT1Q9H211 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.77□□□□□ -1.81
CDT1Q9H211 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 CR848007.1-201ENST00000442354 1699 ntBASIC3.77□□□□□ -1.81
CDT1Q9H211 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.77□□□□□ -1.81
CDT1Q9H211 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.77□□□□□ -1.81
CDT1Q9H211 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDT1Q9H211 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDT1Q9H211 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDT1Q9H211 CEP170P1-201ENST00000502249 4587 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.76□□□□□ -1.81
CDT1Q9H211 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CDT1Q9H211 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDT1Q9H211 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDT1Q9H211 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
CDT1Q9H211 AC027287.1-201ENST00000553115 1453 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDT1Q9H211 Y_RNA.256-201ENST00000364594 104 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 RNU5E-4P-201ENST00000364931 120 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 RNVU1-14-201ENST00000384770 164 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 SNORD115.1-201ENST00000391109 76 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 RPL7P25-201ENST00000404151 721 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 CCNG1P1-201ENST00000406783 885 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC078974.1-201ENST00000411597 223 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 BX890604.2-201ENST00000427883 474 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.76□□□□□ -1.81
CDT1Q9H211 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.76□□□□□ -1.81
CDT1Q9H211 Z99127.3-201ENST00000448158 395 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC104308.1-201ENST00000454621 333 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.76□□□□□ -1.81
CDT1Q9H211 snoU109.1-201ENST00000459339 135 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC092451.1-201ENST00000480211 153 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC021382.1-201ENST00000483523 359 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC093663.1-201ENST00000497190 394 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 FAM92A1P2-202ENST00000504766 877 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDT1Q9H211 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.76□□□□□ -1.81
CDT1Q9H211 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.76□□□□□ -1.81
CDT1Q9H211 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.76□□□□□ -1.81
CDT1Q9H211 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.76□□□□□ -1.81
CDT1Q9H211 OR4R3P-201ENST00000525084 838 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AP003497.1-201ENST00000528472 562 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 DEFB108A-201ENST00000530110 222 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AP003122.4-201ENST00000530980 758 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.76□□□□□ -1.81
CDT1Q9H211 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.76□□□□□ -1.81
CDT1Q9H211 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.76□□□□□ -1.81
CDT1Q9H211 SETP7-201ENST00000552169 453 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.76□□□□□ -1.81
CDT1Q9H211 AC068135.2-201ENST00000569293 1028 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.76□□□□□ -1.81
CDT1Q9H211 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.76□□□□□ -1.81
CDT1Q9H211 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.76□□□□□ -1.81
CDT1Q9H211 AL022154.1-201ENST00000604698 785 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC012468.1-201ENST00000604888 430 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC090578.1-201ENST00000604955 591 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC090970.3-201ENST00000612566 866 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AL590099.1-201ENST00000615276 138 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC108479.2-201ENST00000617314 601 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC022149.2-201ENST00000621061 203 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 AC138649.3-201ENST00000622154 254 ntBASIC3.76□□□□□ -1.81
CDT1Q9H211 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.76□□□□□ -1.81
CDT1Q9H211 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.76□□□□□ -1.81
CDT1Q9H211 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDT1Q9H211 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
CDT1Q9H211 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDT1Q9H211 AL356274.2-201ENST00000624379 3752 ntBASIC3.75□□□□□ -1.81
CDT1Q9H211 MTND5P33-201ENST00000571250 1450 ntBASIC3.75□□□□□ -1.81
CDT1Q9H211 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CDT1Q9H211 EXOC5P1-201ENST00000510543 1969 ntBASIC3.75□□□□□ -1.81
CDT1Q9H211 RNU6-359P-201ENST00000365466 108 ntBASIC3.75□□□□□ -1.81
CDT1Q9H211 Y_RNA.372-201ENST00000365599 102 ntBASIC3.75□□□□□ -1.81
CDT1Q9H211 MIR34B-201ENST00000385076 84 ntBASIC3.75□□□□□ -1.81
CDT1Q9H211 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CDT1Q9H211 RNU6-780P-201ENST00000391030 104 ntBASIC3.75□□□□□ -1.81
CDT1Q9H211 RN7SKP111-201ENST00000410349 271 ntBASIC3.75□□□□□ -1.81
CDT1Q9H211 RNU6-195P-201ENST00000411352 109 ntBASIC3.75□□□□□ -1.81
CDT1Q9H211 RPS3AP3-201ENST00000411933 242 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms