Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RPL31P50-201ENST00000471002 296 ntBASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.34□□□□□ -1.71
SALL3Q9BXA9 MTCO3P9-201ENST00000506989 781 ntBASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AC034159.1-201ENST00000513885 583 ntBASIC4.34□□□□□ -1.71
SALL3Q9BXA9 RNU6-445P-201ENST00000516949 107 ntBASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.34□□□□□ -1.71
SALL3Q9BXA9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AC067852.4-201ENST00000590314 478 ntBASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AC008687.2-201ENST00000597865 520 ntBASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AC011468.4-201ENST00000603942 409 ntBASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AL035413.2-201ENST00000604801 525 ntBASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AC009268.2-201ENST00000621925 457 ntBASIC4.34□□□□□ -1.71
SALL3Q9BXA9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.34□□□□□ -1.71
SALL3Q9BXA9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SALL3Q9BXA9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.34□□□□□ -1.72
SALL3Q9BXA9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.34□□□□□ -1.72
SALL3Q9BXA9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SALL3Q9BXA9 AC018529.3-201ENST00000624212 2254 ntBASIC4.34□□□□□ -1.72
SALL3Q9BXA9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SALL3Q9BXA9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 RPL23AP57-201ENST00000332361 466 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 RNU4-73P-201ENST00000363164 141 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 MIR483-201ENST00000385070 76 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 RPS20P2-201ENST00000402520 389 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 RNU6-195P-201ENST00000411352 109 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AL136380.1-201ENST00000447970 162 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 RBMY2UP-201ENST00000453474 324 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 ANP32BP2-201ENST00000454525 545 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC022364.2-201ENST00000457963 554 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 HMGN1P10-201ENST00000474557 553 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 RPL39P36-201ENST00000490784 156 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 RN7SKP13-201ENST00000515933 244 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 RNU6-202P-201ENST00000515998 96 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 RN7SKP82-201ENST00000516786 223 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 Y_RNA.701-201ENST00000516812 110 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 RNU1-45P-201ENST00000517191 141 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC104986.1-201ENST00000517978 436 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 COX6CP8-201ENST00000522620 226 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC107954.1-201ENST00000565906 727 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 SNORD39.3-201ENST00000584451 71 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AL160281.1-201ENST00000605307 311 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 OR6R2P-201ENST00000609216 300 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AL161734.1-201ENST00000609720 557 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 AC006504.8-201ENST00000621046 635 ntBASIC4.33□□□□□ -1.72
SALL3Q9BXA9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SALL3Q9BXA9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 RNY3P3-201ENST00000363816 102 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 RNU6-289P-201ENST00000364093 107 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 RPL7P25-201ENST00000404151 721 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AL133384.1-201ENST00000412744 351 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 USP9YP20-201ENST00000419224 558 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 SDCBPP1-201ENST00000440192 890 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AL133547.1-201ENST00000448546 220 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 U3.44-201ENST00000458938 192 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC026410.2-201ENST00000460281 156 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC110792.2-201ENST00000510278 224 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 SCARNA15.1-201ENST00000516384 125 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC125611.2-201ENST00000551907 647 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC007424.1-203ENST00000554613 687 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 RPS3AP23-202ENST00000574601 686 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AC093788.1-201ENST00000609356 927 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 PART1_1.1-201ENST00000611761 217 ntBASIC4.32□□□□□ -1.72
SALL3Q9BXA9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms