Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL008629.1-201ENST00000438615 184 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 RPL17P49-201ENST00000443728 411 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AL591719.1-201ENST00000444669 744 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 MRPL50P4-201ENST00000446432 475 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 PRSS3P4-201ENST00000453323 162 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AL359385.1-201ENST00000456509 365 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 RPL27AP5-201ENST00000469428 449 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 RPS26P21-201ENST00000475397 348 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 RN7SL297P-201ENST00000483161 293 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 RNA5SP216-201ENST00000516111 123 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC239860.2-201ENST00000525886 270 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC107016.2-201ENST00000547968 190 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC068313.1-201ENST00000604028 1008 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC106900.2-201ENST00000604994 317 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 RNU6-88P-201ENST00000606801 100 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC097468.3-201ENST00000607956 456 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AL355816.2-201ENST00000610049 647 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AL607023.1-201ENST00000620045 248 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AL356596.1-201ENST00000624230 379 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC034229.5-201ENST00000624258 185 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AP000676.4-201ENST00000624659 623 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 CRYM-AS1-204ENST00000637983 556 ntBASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HDHD3Q9BSH5 AC009487.2-201ENST00000420969 6821 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC104454.1-201ENST00000421341 1401 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 RNA5SP88-201ENST00000365560 109 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 U8.9-201ENST00000365667 134 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 RNU6-76P-201ENST00000384060 104 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 RNU6-769P-201ENST00000384407 104 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AL356421.1-201ENST00000403255 413 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC098592.1-201ENST00000419352 333 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC083875.1-201ENST00000419509 405 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AL158156.1-201ENST00000422509 473 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC093392.2-201ENST00000450682 337 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 OR6C5P-201ENST00000452388 923 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 RPL23AP11-201ENST00000475260 469 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 RPS3AP43-201ENST00000479743 781 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC091826.1-201ENST00000514065 313 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AP003461.1-201ENST00000528866 78 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 HPRT1P3-201ENST00000539521 576 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 LRRC34P1-201ENST00000542742 915 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AL391156.1-201ENST00000554965 554 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC090888.2-201ENST00000559765 1144 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 ISCA1P3-201ENST00000577104 373 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 MIR544B-201ENST00000582372 78 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 SNORD84-203ENST00000584275 78 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC105224.1-201ENST00000587055 421 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC245389.1-201ENST00000605141 529 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AL158211.4-201ENST00000606988 584 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC009159.2-201ENST00000617603 606 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC006111.3-201ENST00000622137 383 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 AC103706.2-201ENST00000638080 240 ntBASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
HDHD3Q9BSH5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms