Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AL607023.1-201ENST00000620045 248 ntBASIC2.7□□□□□ -1.98
EBF4Q9BQW3 AL360181.4-201ENST00000621752 134 ntBASIC2.7□□□□□ -1.98
EBF4Q9BQW3 AC006111.3-201ENST00000622137 383 ntBASIC2.7□□□□□ -1.98
EBF4Q9BQW3 MIR3974-201ENST00000637126 96 ntBASIC2.7□□□□□ -1.98
EBF4Q9BQW3 AP003399.1-201ENST00000637534 361 ntBASIC2.7□□□□□ -1.98
EBF4Q9BQW3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.7□□□□□ -1.98
EBF4Q9BQW3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.7□□□□□ -1.98
EBF4Q9BQW3 SGO1P2-201ENST00000429458 1589 ntBASIC2.7□□□□□ -1.98
EBF4Q9BQW3 AL356473.1-201ENST00000406203 1408 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AC116096.1-201ENST00000566804 2314 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 MIR26A1-201ENST00000362205 77 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 SNORA25.6-201ENST00000364121 118 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 SNORA4.1-201ENST00000364263 144 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 Y_RNA.234-201ENST00000364409 97 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 RNU6-1200P-201ENST00000384162 107 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 MIR135A2-201ENST00000384854 100 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AL356131.1-201ENST00000405826 414 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AL117351.1-201ENST00000438864 766 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 THAP5P1-201ENST00000439089 262 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 SDCBPP1-201ENST00000440192 890 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 UBE2D3P4-201ENST00000441973 436 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 RPL17P49-201ENST00000443728 411 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AL606662.1-201ENST00000445763 553 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AP000705.1-201ENST00000454567 350 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 RPS3AP43-201ENST00000479743 781 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 RN7SL504P-201ENST00000494496 287 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 HSPD1P15-201ENST00000505573 1122 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 TBCAP3-201ENST00000512475 312 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 RNU6-711P-201ENST00000517255 106 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 COX6CP8-201ENST00000522620 226 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 SNRPGP16-201ENST00000533275 226 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 OR6C7P-201ENST00000547875 934 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 ELOCP32-201ENST00000548625 324 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 SETP2-201ENST00000553886 926 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AC087465.1-201ENST00000560574 245 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AL592221.1-201ENST00000605266 382 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AL136981.2-201ENST00000617319 734 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
EBF4Q9BQW3 AC005539.1-201ENST00000443768 1479 ntBASIC2.69□□□□□ -1.98
EBF4Q9BQW3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AL513185.3-201ENST00000433335 1300 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 FRG1BP-201ENST00000278882 761 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 RNU6-28P-201ENST00000362378 107 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 RNU6-289P-201ENST00000364093 107 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 Y_RNA.318-201ENST00000365131 97 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 DEFB109C-201ENST00000382575 264 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 DEFB109B-201ENST00000382656 264 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 SNORD21-201ENST00000383953 95 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC025750.1-201ENST00000399891 379 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 YPEL5P1-201ENST00000419731 367 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC090960.1-201ENST00000421072 306 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 MTCO2P5-201ENST00000422621 426 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 BX119904.4-201ENST00000424402 301 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 MTCO1P39-201ENST00000426148 480 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 RSL24D1P3-201ENST00000449255 495 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 MTCO3P11-201ENST00000455103 774 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC008571.1-201ENST00000467232 300 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 MTND3P7-201ENST00000474435 343 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC147055.4-201ENST00000504399 745 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC098799.2-201ENST00000509466 868 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC093281.2-201ENST00000510153 597 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 RNU6-826P-201ENST00000516827 104 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC105185.1-201ENST00000518705 535 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms