Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL159972.1-201ENST00000625150 448 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.77□□□□□ -1.97
NPAS2Q99743 LRRC77P-213ENST00000637727 880 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
NPAS2Q99743 AL390862.1-201ENST00000635467 1469 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.76□□□□□ -1.97
NPAS2Q99743 AC138915.1-201ENST00000565427 1685 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 ZNF519P1-201ENST00000449011 1626 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NPAS2Q99743 AC000403.1-201ENST00000613696 3585 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NPAS2Q99743 RNU6-1035P-201ENST00000384477 107 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AL031121.1-201ENST00000406553 254 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 SPA17P1-201ENST00000416656 452 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AL449283.1-202ENST00000418249 604 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 TIMM9P2-201ENST00000419324 266 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AC018630.2-202ENST00000422992 927 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 SAR1AP4-201ENST00000429225 591 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AC236972.1-201ENST00000433225 199 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.76□□□□□ -1.97
NPAS2Q99743 RPL31P50-201ENST00000471002 296 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AC147055.4-201ENST00000504399 745 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.76□□□□□ -1.97
NPAS2Q99743 RNU6-56P-201ENST00000516986 93 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 RN7SKP272-201ENST00000516988 232 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AC087373.1-201ENST00000524920 491 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AL133271.1-201ENST00000538229 291 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AADACP1-206ENST00000561502 1193 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
NPAS2Q99743 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.76□□□□□ -1.97
NPAS2Q99743 AC069431.2-201ENST00000604149 1099 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AC021749.1-201ENST00000604322 607 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AC005046.1-201ENST00000608515 625 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AL121895.2-201ENST00000619558 447 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NPAS2Q99743 AC010608.3-201ENST00000625048 527 ntBASIC2.76□□□□□ -1.97
NPAS2Q99743 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.76□□□□□ -1.97
NPAS2Q99743 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NPAS2Q99743 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NPAS2Q99743 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.76□□□□□ -1.97
NPAS2Q99743 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPAS2Q99743 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
NPAS2Q99743 RNU6-270P-201ENST00000364131 105 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 RNU6-925P-201ENST00000384629 104 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 RNA5SP80-201ENST00000410475 111 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 TPMTP3-201ENST00000411928 735 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 Z85995.1-201ENST00000415547 335 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 RPL7L1P10-201ENST00000427790 463 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AL512844.2-201ENST00000433990 593 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AC093156.1-201ENST00000440382 670 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AL135938.1-201ENST00000443141 297 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 RPL39P40-201ENST00000445481 146 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.75□□□□□ -1.97
NPAS2Q99743 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPAS2Q99743 snoU13.28-201ENST00000459235 104 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AC011979.1-201ENST00000472300 483 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 RPS26P21-201ENST00000475397 348 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.75□□□□□ -1.97
NPAS2Q99743 RPS27AP9-201ENST00000477681 438 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AL135752.1-201ENST00000479477 471 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.75□□□□□ -1.97
NPAS2Q99743 AC009901.1-201ENST00000506703 541 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AC119751.4-201ENST00000507498 357 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 RPL23AP94-201ENST00000512518 302 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 RNU6-714P-201ENST00000516963 103 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.75□□□□□ -1.97
NPAS2Q99743 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.75□□□□□ -1.97
NPAS2Q99743 ELOCP31-201ENST00000540463 467 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NPAS2Q99743 AL132857.1-201ENST00000555180 708 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AL157394.1-201ENST00000562983 1224 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.75□□□□□ -1.97
NPAS2Q99743 AL353997.4-201ENST00000586196 166 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.75□□□□□ -1.97
NPAS2Q99743 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.75□□□□□ -1.97
NPAS2Q99743 BNIP3P26-201ENST00000600827 554 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AL136363.1-201ENST00000605349 337 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.75□□□□□ -1.97
NPAS2Q99743 AC024933.1-201ENST00000608472 348 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AC008443.7-201ENST00000622195 246 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 AL445984.1-201ENST00000637834 659 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
NPAS2Q99743 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.75□□□□□ -1.97
NPAS2Q99743 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPAS2Q99743 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.75□□□□□ -1.97
NPAS2Q99743 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPAS2Q99743 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NPAS2Q99743 AL022578.1-201ENST00000439330 1433 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.75□□□□□ -1.97
NPAS2Q99743 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.75□□□□□ -1.97
NPAS2Q99743 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.74□□□□□ -1.97
NPAS2Q99743 AL049641.1-201ENST00000441055 1948 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC022336.2-201ENST00000568966 2538 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC009487.2-201ENST00000420969 6821 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 MAPK10-266ENST00000641066 6555 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NPAS2Q99743 RNU6-343P-201ENST00000364709 104 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NPAS2Q99743 Y_RNA.500-201ENST00000384466 111 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms